RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 GPR158Q5T848 1215 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 LIPMQ5VYY2 423 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 CMTR2Q8IYT2 770 aaKnown RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
CLK3-203ENST00000454830 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 ALG9Q9H6U8 611 aa13.72□□□□□ -0.21
CLK3-203ENST00000454830 LDB2O43679 373 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 KLHL2O95198 593 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLK3-203ENST00000454830 FMO4P31512 558 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 ARRB2P32121 409 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 ARL13AQ5H913 290 aaPredicted RBP13.71□□□□□ -0.21
CLK3-203ENST00000454830 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 TCEAL8Q8IYN2 117 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 SLC7A6OSQ96CW6 309 aaPredicted RBP13.71□□□□□ -0.21
CLK3-203ENST00000454830 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 MYRFLQ96LU7 910 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 K7ERQ8 282 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 TSPAN8P19075 237 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 KIAA0408Q6ZU52 694 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 RPS27LQ71UM5 84 aaKnown RBP13.71□□□□□ -0.21
CLK3-203ENST00000454830 ASRGL1Q7L266 308 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
CLK3-203ENST00000454830 TREML1Q86YW5 311 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 GPR63Q9BZJ6 419 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 WDR55Q9H6Y2 383 aaPredicted RBP13.71□□□□□ -0.21
CLK3-203ENST00000454830 COG4Q9H9E3 785 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 OXSMQ9NWU1 459 aa13.71□□□□□ -0.21
CLK3-203ENST00000454830 CEP290O15078 2479 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 LOC285095A0A1B0GVY8 99 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 DLX3O60479 287 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.22
CLK3-203ENST00000454830 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.22
CLK3-203ENST00000454830 RHOBTB1O94844 696 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 MT-CO1P00395 513 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 TFEBP19484 476 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 ASPHQ12797 758 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 DLG1Q12959 904 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 CCDC6Q16204 474 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 TEX9Q8N6V9 391 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 INPP5DQ92835 1189 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 SORT1Q99523 831 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.22
CLK3-203ENST00000454830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLK3-203ENST00000454830 ADH1AP07327 375 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CTNNB1P35222 781 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 MAGEA12P43365 314 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CLEC14AQ86T13 490 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CNTN4Q8IWV2 1026 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 ZNF689Q96CS4 500 aaPredicted RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 RPL10LQ96L21 214 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 BTBD10Q9BSF8 475 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 PDFQ9HBH1 243 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 A0A087X1B8 175 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 DCXO43602 365 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 MGRN1O60291 552 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 SRP72O76094 671 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 LTA4HP09960 611 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 PGM1P36871 562 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 ARL1P40616 181 aaPredicted RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 IDH3AP50213 366 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 SESN3P58005 492 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CYTH1Q15438 398 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 DBN1Q16643 649 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 VWCEQ96DN2 955 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CDKN2AIPNLQ96HQ2 116 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 MGME1Q9BQP7 344 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 H3BNC9 293 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 FGBP02675 491 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 EPHA3P29320 983 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 GKP32189 559 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 ISL2Q96A47 359 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 TRMT2BQ96GJ1 504 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 CDH19Q9H159 772 aa13.7□□□□□ -0.22
CLK3-203ENST00000454830 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
CLK3-203ENST00000454830 CHUKO15111 745 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms