RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 TREX1Q9NSU2 369 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 EBF1Q9UH73 591 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 SNAI1O95863 264 aaPredicted RBP15.8■□□□□ 0.12
TRA2B-205ENST00000453386 HNRNPCP07910 306 aaKnown RBP eCLIP15.8■□□□□ 0.121e-5■□□□□ 9.8
TRA2B-205ENST00000453386 SMIM10L2AP0DMW4 78 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 SMIM10L2BP0DMW5 78 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 BMP2P12643 396 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 ETFBP38117 255 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 UBXN11Q5T124 520 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
TRA2B-205ENST00000453386 KIAA0930Q6ICG6 404 aaPredicted RBP15.8■□□□□ 0.12
TRA2B-205ENST00000453386 ERMP1Q7Z2K6 904 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 LDB1Q86U70 411 aaPredicted RBP15.8■□□□□ 0.12
TRA2B-205ENST00000453386 RETREG3Q86VR2 466 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 GFM2Q969S9 779 aaKnown RBP15.8■□□□□ 0.12
TRA2B-205ENST00000453386 C3orf30Q96M34 536 aa15.8■□□□□ 0.12
TRA2B-205ENST00000453386 HLA-DQB2P05538 268 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 ZNF135P52742 658 aaPredicted RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 VPS26BQ4G0F5 336 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 FUNDC1Q8IVP5 155 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 ARHGAP12Q8IWW6 846 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 DUS3LQ96G46 650 aaKnown RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 FAM210AQ96ND0 272 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 SLC39A8Q9C0K1 460 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 SMOXQ9NWM0 555 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 GIMAP2Q9UG22 337 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 A0A087WXM4 84 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 A0A0J9YYE9 177 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 MAFKO60675 156 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 BMP10O95393 424 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 AXLP30530 894 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 XKR4Q5GH76 650 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 GPR158Q5T848 1215 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 FAM43BQ6ZT52 329 aaPredicted RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 FASTKD5Q7L8L6 764 aaKnown RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 CAMK1DQ8IU85 385 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 SLC22A9Q8IVM8 553 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 RYBPQ8N488 228 aaPredicted RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 OR6P1Q8NGX9 317 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 PTCD2Q8WV60 388 aaKnown RBP15.79■□□□□ 0.12
TRA2B-205ENST00000453386 C19orf60Q96EN9 201 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 GSTO2Q9H4Y5 243 aa15.79■□□□□ 0.12
TRA2B-205ENST00000453386 CCL22O00626 93 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 PTGESO14684 152 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 MATN3O15232 486 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CAPN15O75808 1086 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ADRA1AP35348 466 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 KCNC1P48547 511 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 NUP107P57740 925 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 C16orf72Q14CZ0 275 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 RAB41Q5JT25 222 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 HECTD2Q5U5R9 776 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 LARP4Q71RC2 724 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■□□□□ 11.1
TRA2B-205ENST00000453386 GPC2Q8N158 579 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 SMG8Q8ND04 991 aaKnown RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 MRGPRX2Q96LB1 330 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 IL12RB2Q99665 862 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 AKTIPQ9H8T0 292 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 NDFIP2Q9NV92 336 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ARMC1Q9NVT9 282 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 KCNH4Q9UQ05 1017 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 PTGDR2Q9Y5Y4 395 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 LTBP3Q9NS15 1303 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DHRS12A0PJE2 317 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ALDOCP09972 364 aaKnown RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 IL10P22301 178 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 SOX11P35716 441 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ENTPD1P49961 510 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CAPRIN1Q14444 709 aaKnown RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ACAP2Q15057 778 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CYHR1Q6ZMK1 362 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DPP9Q86TI2 863 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 GPRC5AQ8NFJ5 357 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DQX1Q8TE96 717 aaKnown RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CYGBQ8WWM9 190 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 TSPAN17Q96FV3 270 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 PRKD2Q9BZL6 878 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CCM2LQ9NUG4 571 aaPredicted RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DSEQ9UL01 958 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 VWA7Q9Y334 891 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CROCCQ5TZA2 2017 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 SCN4AP35499 1836 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 FAM155AB1AL88 458 aaPredicted RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 NME4O00746 187 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 DYNC1LI2O43237 492 aaPredicted RBP15.78■□□□□ 0.12
TRA2B-205ENST00000453386 CLIC3O95833 236 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 IMPDH1P20839 514 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 WNT3AP56704 352 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ZNF33AQ06730 810 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ITKQ08881 620 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 INPP5AQ14642 412 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 RANBP10Q6VN20 620 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 HACD2Q6Y1H2 254 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ROPN1LQ96C74 230 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 ISOC1Q96CN7 298 aa15.78■□□□□ 0.12
TRA2B-205ENST00000453386 BIRC8Q96P09 236 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms