RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ARMC3Q5W041 872 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 PKN3Q6P5Z2 889 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 Q6ZS52 159 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 USP45Q70EL2 814 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 TTC7BQ86TV6 843 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 PTCD2Q8WV60 388 aaKnown RBP19.61■□□□□ 0.73
SGCE-207ENST00000447873 RANBP9Q96S59 729 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 SRPK1Q96SB4 655 aaKnown RBP19.61■□□□□ 0.73
SGCE-207ENST00000447873 TBC1D17Q9HA65 648 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 MAGEE1Q9HCI5 957 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 LRRC4CQ9HCJ2 640 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.61■□□□□ 0.73
SGCE-207ENST00000447873 SOX13Q9UN79 622 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 TCAF1Q9Y4C2 921 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 SPO11Q9Y5K1 396 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 RIPK2O43353 540 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 CRTAMO95727 393 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 POLBP06746 335 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 COL9A1P20849 921 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 HSD17B3P37058 310 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ZXDAP98168 799 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 CST6Q15828 149 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ZNF776Q68DI1 518 aaPredicted RBP19.61■□□□□ 0.73
SGCE-207ENST00000447873 CAPN12Q6ZSI9 719 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 NLRP9Q7RTR0 991 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 GLT6D1Q7Z4J2 308 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 ARRDC3Q96B67 414 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 SCRN2Q96FV2 425 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 TRIM56Q9BRZ2 755 aaKnown RBP19.61■□□□□ 0.73
SGCE-207ENST00000447873 KIFC1Q9BW19 673 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 VPS37BQ9H9H4 285 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 PPIL1Q9Y3C6 166 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 RPS6KL1Q9Y6S9 549 aa19.61■□□□□ 0.73
SGCE-207ENST00000447873 FAM237BA0A1B0GVD1 139 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 CAPN8A6NHC0 703 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 UPK3BL1B0FP48 263 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 UPK3BL2E5RIL1 263 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 ADH1BP00325 375 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 TIMP2P16035 220 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 SSTR1P30872 391 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 HNF1BP35680 557 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 METAP1P53582 386 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 COPAP53621 1224 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 PTPRRQ15256 657 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 LRRC73Q5JTD7 316 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 SPDYCQ5MJ68 293 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 FBXL19Q6PCT2 694 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 CES3Q6UWW8 571 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 UNC5AQ6ZN44 842 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 C3orf62Q6ZUJ4 267 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 PARS2Q7L3T8 475 aaKnown RBP19.6■□□□□ 0.73
SGCE-207ENST00000447873 CACUL1Q86Y37 369 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 TRABDQ9H4I3 376 aa19.6■□□□□ 0.73
SGCE-207ENST00000447873 MRM3Q9HC36 420 aaKnown RBP19.6■□□□□ 0.73
SGCE-207ENST00000447873 CCDC78A2IDD5 438 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 LDB2O43679 373 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 ATG13O75143 517 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 SLC4A1P02730 911 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 TSHRP16473 764 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 PHBP35232 272 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 FAM193AP78312 1265 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 TAF1AQ15573 450 aaPredicted RBP19.59■□□□□ 0.73
SGCE-207ENST00000447873 UAP1Q16222 522 aaPredicted RBP19.59■□□□□ 0.73
SGCE-207ENST00000447873 TMEM135Q86UB9 458 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 TMPRSS6Q8IU80 811 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.59■□□□□ 0.73
SGCE-207ENST00000447873 MDGA1Q8NFP4 955 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 ZNF669Q96BR6 464 aaPredicted RBP19.59■□□□□ 0.73
SGCE-207ENST00000447873 MFSD3Q96ES6 412 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 MCCC1Q96RQ3 725 aaPredicted RBP19.59■□□□□ 0.73
SGCE-207ENST00000447873 LYSMD1Q96S90 227 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 GPR63Q9BZJ6 419 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 MKRN2Q9H000 416 aaKnown RBP19.59■□□□□ 0.73
SGCE-207ENST00000447873 ZNF711Q9Y462 761 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 ARL5AQ9Y689 179 aa19.59■□□□□ 0.73
SGCE-207ENST00000447873 C1orf232A0A0U1RR37 186 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 MROH6A6NGR9 719 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 NPIPB15A6NHN6 443 aaPredicted RBP19.58■□□□□ 0.73
SGCE-207ENST00000447873 C2orf81A6NN90 581 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 A8MX80 341 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 CHURC1-FNTBB4DL54 471 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 AURKAO14965 403 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 MID1O15344 667 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 SPAG6O75602 509 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 USP1O94782 785 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 GSTA2P09210 222 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 C5AR1P21730 350 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 NMBRP28336 390 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 GPX6P59796 221 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 RPS14P62263 151 aaKnown RBP19.58■□□□□ 0.73
SGCE-207ENST00000447873 FZD5Q13467 585 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 SLC29A2Q14542 456 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 CRYMQ14894 314 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 CRY1Q16526 586 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 ANKRD20A4Q4UJ75 823 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 SPANXN3Q5MJ09 141 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 UBAP2Q5T6F2 1119 aaKnown RBP19.58■□□□□ 0.73
SGCE-207ENST00000447873 ERAP2Q6P179 960 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 TMEM92Q6UXU6 159 aa19.58■□□□□ 0.73
SGCE-207ENST00000447873 ERN2Q76MJ5 926 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms