RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 TBC1D3DA0A087WVF3 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3IA0A087WXS9 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3EA0A087X179 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3KA0A087X1G2 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3FA6NER0 549 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 UPK3BL1B0FP48 263 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3LB9A6J9 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 UPK3BL2E5RIL1 263 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 PLK4O00444 970 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TRAFD1O14545 582 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 NDC80O14777 642 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 SLC30A4O14863 429 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 NDST3O95803 873 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 APRTP07741 180 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3HP0C7X1 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TIMP2P16035 220 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 PTGER3P43115 390 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 GRIA4P48058 902 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 METAP1P53582 386 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 SARNPP82979 210 aaKnown RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 FOXK2Q01167 660 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 PTK6Q13882 451 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 CCDC6Q16204 474 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 AASDHQ4L235 1098 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3GQ6DHY5 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3CQ6IPX1 549 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 NAPEPLDQ6IQ20 393 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 KDELC1Q6UW63 502 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 PPP1R21Q6ZMI0 780 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 JAMLQ86YT9 394 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 SYT12Q8IV01 421 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TBC1D3Q8IZP1 549 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 SLC25A41Q8N5S1 370 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 CADM4Q8NFZ8 388 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 FOXJ1Q92949 421 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TADA1Q96BN2 335 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 ECHDC3Q96DC8 303 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 SRPK1Q96SB4 655 aaKnown RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 MLPHQ9BV36 600 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 CARD6Q9BX69 1037 aa11.65□□□□□ -0.54
LINC00408-201ENST00000447784 WSB2Q9NYS7 404 aaPredicted RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
LINC00408-201ENST00000447784 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.55
LINC00408-201ENST00000447784 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
LINC00408-201ENST00000447784 AP3B1O00203 1094 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
LINC00408-201ENST00000447784 TTI1O43156 1089 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 TSPAN6O43657 245 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 GDF9O60383 454 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PCDH8O95206 1070 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SEMA4FO95754 770 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 AP2A1O95782 977 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 AGTP01019 485 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PDHA1P08559 390 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 CTPS1P17812 591 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 HLA-DPA1P20036 260 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 DRD3P35462 400 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PTGIRP43119 386 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 TERF1P54274 439 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 CDK16Q00536 496 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SEMA5AQ13591 1074 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 ARHGEF7Q14155 803 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 GALNT3Q14435 633 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SPARCL1Q14515 664 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SYCP2LQ5T4T6 812 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PIP5KL1Q5T9C9 394 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 RABEPKQ7Z6M1 372 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PCGF5Q86SE9 256 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 DNAAF3Q8N9W5 541 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 OR2T34Q8NGX1 318 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 CXorf40AQ8TE69 158 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PIH1D2Q8WWB5 315 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PIGKQ92643 395 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SCRN2Q96FV2 425 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 NSMCE3Q96MG7 304 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 TBL1YQ9BQ87 522 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 APOL2Q9BQE5 337 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PCED1AQ9H1Q7 454 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PREBQ9HCU5 417 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PCDH12Q9NPG4 1184 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 CD93Q9NPY3 652 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 SERGEFQ9UGK8 458 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 PILRBQ9UKJ0 227 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 ZNF292O60281 2723 aa11.64□□□□□ -0.55
LINC00408-201ENST00000447784 LOC285095A0A1B0GVY8 99 aa11.63□□□□□ -0.55
LINC00408-201ENST00000447784 EFCAB8A8MWE9 144 aa11.63□□□□□ -0.55
LINC00408-201ENST00000447784 ANKRD66B4E2M5 251 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms