RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 XKR5Q6UX68 686 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 GPR141Q7Z602 305 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TFAP2DQ7Z6R9 452 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 ZNF354CQ86Y25 554 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DDIASQ8IXT1 998 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DCBLD1Q8N8Z6 715 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 C12orf43Q96C57 262 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 CD300AQ9UGN4 299 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 CNOT11Q9UKZ1 510 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DERAQ9Y315 318 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TCAF1Q9Y4C2 921 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 NCAM2O15394 837 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 HSPA1AP0DMV8 641 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 HSPA1BP0DMV9 641 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 CLCNKBP51801 687 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 CDKN2DP55273 166 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 KCTD21Q4G0X4 260 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 EPHX4Q8IUS5 362 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 NUDT8Q8WV74 236 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 PBXIP1Q96AQ6 731 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 ISOC1Q96CN7 298 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 RANBP9Q96S59 729 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TMEM165Q9HC07 324 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 MAP10Q9P2G4 905 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 PADI4Q9UM07 663 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 OAZ3Q9UMX2 235 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DOLKQ9UPQ8 538 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 LAMA2P24043 3122 aaKnown RBP14.27□□□□□ -0.12
ERCC3-203ENST00000445889 A0A0J9YYE9 177 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 H3BMM5 538 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 DLGAP1O14490 977 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 LINC00032P0C843 101 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 ARSDP51689 593 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 SLC5A3P53794 718 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 SH3BP2P78314 561 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 PLIN5Q00G26 463 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 SQLEQ14534 574 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 UGP2Q16851 508 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 UBXN11Q5T124 520 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 DPP9Q86TI2 863 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 SMG8Q8ND04 991 aaKnown RBP14.27□□□□□ -0.12
ERCC3-203ENST00000445889 FNDC8Q8TC99 324 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 VPS33AQ96AX1 596 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 GAD1Q99259 594 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 EFHD1Q9BUP0 239 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 UTP6Q9NYH9 597 aaKnown RBP14.27□□□□□ -0.12
ERCC3-203ENST00000445889 MARCH4Q9P2E8 410 aaPredicted RBP14.27□□□□□ -0.12
ERCC3-203ENST00000445889 ZNF510Q9Y2H8 683 aa14.27□□□□□ -0.12
ERCC3-203ENST00000445889 TCRBV3S1A0A5B6 114 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 NPHS1O60500 1241 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 ATE1O95260 518 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 SMIM10L2AP0DMW4 78 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 SMIM10L2BP0DMW5 78 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 CD247P20963 164 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 PRKAA2P54646 552 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 SNX17Q15036 470 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 RABL3Q5HYI8 236 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 LINC00523Q86TU6 105 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 ERO1BQ86YB8 467 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 ARHGAP12Q8IWW6 846 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 TMEM209Q96SK2 561 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 TMEM181Q9P2C4 612 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 CPA4Q9UI42 421 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 TTC3P53804 2025 aa14.27□□□□□ -0.13
ERCC3-203ENST00000445889 INPP4BO15327 924 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 MAFKO60675 156 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 PRSS56P0CW18 603 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 CAPN3P20807 821 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 HADHAP40939 763 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 HK2P52789 917 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 NAA20P61599 178 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 ESRRGP62508 458 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 CREB5Q02930 508 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 NEDD8Q15843 81 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 C2CD4AQ8NCU7 369 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-203ENST00000445889 TFAP2CQ92754 450 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 DPF3Q92784 378 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 ESAMQ96AP7 390 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 DCPSQ96C86 337 aaKnown RBP14.26□□□□□ -0.13
ERCC3-203ENST00000445889 CDCA5Q96FF9 252 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 SEPHS2Q99611 448 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 PAIP1Q9H074 479 aaKnown RBP14.26□□□□□ -0.13
ERCC3-203ENST00000445889 UPF3AQ9H1J1 476 aaKnown RBP14.26□□□□□ -0.13
ERCC3-203ENST00000445889 MEAF6Q9HAF1 191 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 SLAMF8Q9P0V8 285 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 AAR2Q9Y312 384 aaKnown RBP14.26□□□□□ -0.13
ERCC3-203ENST00000445889 A0A1W2PPW3 197 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 GIPC1O14908 333 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 WNT3AP56704 352 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 IHHQ14623 411 aa14.26□□□□□ -0.13
ERCC3-203ENST00000445889 ZIK1Q3SY52 487 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms