RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 UGT1A9O60656 530 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 NEK2P51955 445 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 PARP15Q460N3 678 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 CLEC20AQ6ZU45 233 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 PIK3R5Q8WYR1 880 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 DDX1Q92499 740 aaKnown RBP22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 SLC25A51Q9H1U9 297 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 UGT1A7Q9HAW7 530 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 UGT1A10Q9HAW8 530 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 UGT1A8Q9HAW9 530 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 PTGES3LE9PB15 166 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 NDST3O95803 873 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 COL6A2P12110 1019 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 NOVP48745 357 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 GPR158Q5T848 1215 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 MARK2Q7KZI7 788 aaKnown RBP22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 AMIGO2Q86SJ2 522 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 TRIM69Q86WT6 500 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 OR7D4Q8NG98 312 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 TEKT5Q96M29 485 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 DCUN1D5Q9BTE7 237 aa22.5■■□□□ 1.19
CTDSPL-206ENST00000443503 MATN3O15232 486 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 IPO13O94829 963 aaKnown RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 TACR2P21452 398 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 PIGWQ7Z7B1 504 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 MAGEE2Q8TD90 523 aaPredicted RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 COPS8Q99627 209 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 SIX4Q9UIU6 781 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 COX7A2P14406 83 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 SELPP16109 830 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 DLG2Q15700 870 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 VARS2Q5ST30 1063 aaKnown RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 FAM228AQ86W67 206 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 CAMK1DQ8IU85 385 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 ZNF557Q8N988 423 aaPredicted RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 SNRNP27Q8WVK2 155 aaKnown RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 SUSD6Q92537 303 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 TRAPPC9Q96Q05 1148 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 AGAP2Q99490 1192 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 BBS2Q9BXC9 721 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 CORO1AP31146 461 aaKnown RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 SGCGQ13326 291 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 TIGD2Q4W5G0 525 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 ACBD5Q5T8D3 534 aaPredicted RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 CDCA2Q69YH5 1023 aaPredicted RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 CIR1Q86X95 450 aaPredicted RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 CRYBG2Q8N1P7 616 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 ACTRT2Q8TDY3 377 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 ABHD8Q96I13 439 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 DDX18Q9NVP1 670 aaKnown RBP22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 TCAF1Q9Y4C2 921 aa22.49■■□□□ 1.19
CTDSPL-206ENST00000443503 KCNU1A8MYU2 1149 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 HK2P52789 917 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 CLVS1Q8IUQ0 354 aaPredicted RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 MAB21L3Q8N8X9 362 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 THG1LQ9NWX6 298 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 RGS5O15539 181 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 SIN3BO75182 1162 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 RASSF9O75901 435 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 SNUPNO95149 360 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 ATG7O95352 703 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PAX7P23759 505 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 TAS1R3Q7RTX0 852 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 DENND6AQ8IWF6 608 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PPP3R2Q96LZ3 170 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 TRMT13Q9NUP7 481 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 EGFL7Q9UHF1 273 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 SPACA6W5XKT8 324 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PRMT5O14744 637 aaPredicted RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PSMB9P28065 219 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 SMARCB1Q12824 385 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 FAM187BQ17R55 369 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 FUT10Q6P4F1 479 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 DSG4Q86SJ6 1040 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 ZNF276Q8N554 614 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PRPF19Q9UMS4 504 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 STYXL1Q9Y6J8 313 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 HCRTO43612 131 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 RPP40O75818 363 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 KCNH1O95259 989 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 ADH1AP07327 375 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 PKMP14618 531 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 LINGO4Q6UY18 593 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 BCO2Q9BYV7 579 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 GRIP2Q9C0E4 1043 aa22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 MRPS23Q9Y3D9 190 aaKnown RBP22.48■■□□□ 1.19
CTDSPL-206ENST00000443503 MYO9BQ13459 2157 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 OTCP00480 354 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 HSMCR30P0CW71 290 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 HPS6Q86YV9 775 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 PIGVQ9NUD9 493 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 SNX6Q9UNH7 406 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 SLC12A4Q9UP95 1085 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 RTL3Q8N8U3 475 aaKnown RBP22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 PTCD3Q96EY7 689 aaKnown RBP22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 PCDHGC4Q9Y5F7 938 aa22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 PRRC2BQ5JSZ5 2229 aaKnown RBP22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.47■■□□□ 1.19
CTDSPL-206ENST00000443503 CES1P23141 567 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms