RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 NDUFS7O75251 213 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE7O76087 117 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 KDM4BO94953 1096 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 MMP2P08253 660 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SNRNP70P08621 437 aaKnown RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE12FP0CL80 117 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE12GP0CL81 117 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE12IP0CL82 117 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 COX7A2P14406 83 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 AGAP20933 346 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GPTP24298 496 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE1Q13065 139 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 GAGE4Q13068 117 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 NEDD9Q14511 834 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 RNPS1Q15287 305 aaKnown RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 HIST2H2ACQ16777 129 aaPredicted RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 TCTN1Q2MV58 587 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 AMZ1Q400G9 498 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SLC9B1Q4ZJI4 515 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 PPP6R3Q5H9R7 873 aaPredicted RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 PAPPA-AS1Q5QFB9 102 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 TXNDC8Q6A555 127 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 CPLX2Q6PUV4 134 aaKnown RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 B3GNT6Q6ZMB0 384 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SMC5Q8IY18 1101 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SLC35F3Q8IY50 421 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 ZCCHC9Q8N567 271 aaKnown RBP4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 KLHL29Q96CT2 875 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 RNF125Q96EQ8 232 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 BICD1Q96G01 975 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 ZNF570Q96NI8 536 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 MAGEE1Q9HCI5 957 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 PPP1R14DQ9NXH3 145 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 ZNF112Q9UJU3 913 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 ICAM5Q9UMF0 924 aa4.41□□□□□ -1.7
AC003001.1-201ENST00000443247 CCDC196A0A1B0GTZ2 297 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 CLGNO14967 610 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 LDLRAD4O15165 306 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 PMS2P2O95744 297 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 TFP02787 698 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 IRF1P10914 325 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 XBP1P17861 261 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 STX2P32856 288 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 EIF2S3P41091 472 aaKnown RBP4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 ZNF718Q3SXZ3 478 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 FAM76BQ5HYJ3 339 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 ANKRD54Q6NXT1 300 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 MTSS1LQ765P7 747 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 HEATR4Q86WZ0 1026 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 ESX1Q8N693 406 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 AGBL3Q8NEM8 1001 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 BEST2Q8NFU1 509 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 ST8SIA4Q92187 359 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 C3orf30Q96M34 536 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 IL17FQ96PD4 163 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 SLITRK1Q96PX8 696 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 VEZTQ9HBM0 779 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 MPP6Q9NZW5 540 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 RCOR1Q9UKL0 485 aa4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 LSM4Q9Y4Z0 139 aaKnown RBP4.4□□□□□ -1.71
AC003001.1-201ENST00000443247 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SOCS6O14544 535 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 BUB3O43684 328 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 LDB3O75112 727 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 DDNO94850 711 aaPredicted RBP4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 CLDN14O95500 239 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 CYC1P08574 325 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SHMT1P34896 483 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 PAFAH1B1P43034 410 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 OASLQ15646 514 aaKnown RBP4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 BAK1Q16611 211 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ATP13A5Q4VNC0 1218 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 FAM69AQ5T7M9 428 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 WDR73Q6P4I2 378 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 DSELQ8IZU8 1212 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ZBTB2Q8N680 514 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SPATA20Q8TB22 786 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 RND1Q92730 232 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ZNF385AQ96PM9 386 aaKnown RBP4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 KXD1Q9BQD3 176 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 GLIS2Q9BZE0 524 aaPredicted RBP4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ESRP2Q9H6T0 727 aaKnown RBP4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 WASH6PQ9NQA3 447 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 CNGB3Q9NQW8 809 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ZNF224Q9NZL3 707 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 KCND2Q9NZV8 630 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SIX4Q9UIU6 781 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 KCNG2Q9UJ96 466 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 GJD2Q9UKL4 321 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 SARDHQ9UL12 918 aa4.39□□□□□ -1.71
AC003001.1-201ENST00000443247 ARHGAP26Q9UNA1 814 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms