RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KRT33BQ14525 404 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF77Q15935 545 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 HIF1AQ16665 826 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARTNQ5T4W7 220 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 EGFLAMQ63HQ2 1017 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF449Q6P9G9 518 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 PAQR9Q6ZVX9 377 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 HTR3DQ70Z44 454 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 SCD5Q86SK9 330 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 TREML1Q86YW5 311 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBXO36Q8NEA4 188 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CXorf40AQ8TE69 158 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 LRRC37BQ96QE4 947 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CCDC106Q9BWC9 280 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 TNKS2Q9H2K2 1166 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CABIN1Q9Y6J0 2220 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 RP1L1Q8IWN7 2480 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 C2CD4BA6NLJ0 364 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ENTPD5O75356 428 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 POU2F2P09086 479 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAOBP27338 520 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARRB2P32121 409 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CDH4P55283 916 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 INAVAQ3KP66 663 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACSBG2Q5FVE4 666 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACBD5Q5T8D3 534 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 FBXL22Q6P050 247 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 PCGF5Q86SE9 256 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 MTDHQ86UE4 582 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM105Q8N8V8 129 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 WDR60Q8WVS4 1066 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 AZIN2Q96A70 460 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLF16Q9BXK1 252 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACE2Q9BYF1 805 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 TAS2R1Q9NYW7 299 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 HECAQ9UBI9 543 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 EMCNQ9ULC0 261 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ERVW-1Q9UQF0 538 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 A8MX80 341 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 SMAPO00193 183 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 DCTN3O75935 186 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ADRA1BP35368 520 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 PTDSS1P48651 473 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF33AQ06730 810 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 BCL2L1Q07817 233 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 DMWDQ09019 674 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 FCHO2Q0JRZ9 810 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACAP1Q15027 740 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CRY1Q16526 586 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CYS1Q717R9 158 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CENPUQ71F23 418 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 KBTBD6Q86V97 674 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 GPATCH11Q8N954 259 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 SCG3Q8WXD2 468 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 GATA6Q92908 595 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 NAF1Q96HR8 494 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 APOPT1Q96IL0 206 aa7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 MMADHCQ9H3L0 296 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-208ENST00000442054 CACNA1EQ15878 2313 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 UGT2B4P06133 528 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLHDC10Q6PID8 442 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MAVSQ7Z434 540 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 LIMS2Q7Z4I7 341 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM110Q86TL2 294 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 LRRC6Q86X45 466 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CENPIQ92674 756 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM83CQ9BQN1 747 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 GORASP1Q9BQQ3 440 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SLC4A5Q9BY07 1137 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CSNK1G1Q9HCP0 422 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 NKIRAS1Q9NYS0 192 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SNX10Q9Y5X0 201 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 URB1O60287 2271 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 EDDM13A0A1B0GTR0 161 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM159BA6NKW6 160 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 E9PAM4 449 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 ANHXE9PGG2 379 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 NPC1O15118 1278 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 BUD23O43709 281 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 RPSAP08865 295 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MIPP30301 263 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 OXTRP30559 389 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CCNHP51946 323 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 CDK16Q00536 496 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SRSF5Q13243 272 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MS4A13Q5J8X5 152 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 STEAP4Q687X5 459 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 NPNTQ6UXI9 565 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 TIFABQ6ZNK6 161 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 C3orf62Q6ZUJ4 267 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 SIGLEC10Q96LC7 697 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 C7orf26Q96N11 449 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 BTBD10Q9BSF8 475 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 OSBPL6Q9BZF3 934 aa7.43□□□□□ -1.22
CDC42BPA-208ENST00000442054 MOCS1Q9NZB8 636 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms