RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TUBA1CQ9BQE3 449 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 WDR12Q9GZL7 423 aaKnown RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 ADAMTS10Q9H324 1103 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 TRIT1Q9H3H1 467 aaKnown RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 SNTG2Q9NY99 539 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 MTRRQ9UBK8 725 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 APOL1O14791 398 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 XYLBO75191 536 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 BCAS1O75363 584 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 MMP3P08254 477 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SOX11P35716 441 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 ARL1P40616 181 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 TRAP1Q12931 704 aaKnown RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 SLCO6A1Q86UG4 719 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SPPL2CQ8IUH8 684 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 TOP1MTQ969P6 601 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 NRBF2Q96F24 287 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 CEP295NLQ96MC4 621 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 IL1RL2Q9HB29 575 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 TRIP11Q15643 1979 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 ILVBLA1L0T0 632 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 HCRTO43612 131 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SEC14L2O76054 403 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SNAP29O95721 258 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 MBL2P11226 248 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 CAPGP40121 348 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 NDST1P52848 882 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SLC13A2Q13183 592 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 POLD3Q15054 466 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 PAGE2BQ5JRK9 111 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 INTS11Q5TA45 600 aaKnown RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 UBE2UQ5VVX9 321 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 UGT3A1Q6NUS8 523 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 GPN2Q9H9Y4 310 aaPredicted RBP16.87■□□□□ 0.29
PMS1-213ENST00000441310 FAM49BQ9NUQ9 324 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 DPP3Q9NY33 737 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 KLK14Q9P0G3 267 aa16.87■□□□□ 0.29
PMS1-213ENST00000441310 SIP14410 1827 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 GABBR2O75899 941 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 MICAL2O94851 1124 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 CPNE6O95741 557 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ADSLP30566 484 aaPredicted RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 GP5P40197 560 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 PLA2G16P53816 162 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 COPZ1P61923 177 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 NSUN2Q08J23 767 aaKnown RBP eCLIP16.86■□□□□ 0.29
PMS1-213ENST00000441310 ANO4Q32M45 955 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ZIK1Q3SY52 487 aaPredicted RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 RFPL4BQ6ZWI9 263 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 PACRGLQ8N7B6 248 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 CCNYL1Q8N7R7 359 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 C9orf16Q9BUW7 83 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ADNPQ9H2P0 1102 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 MRPL46Q9H2W6 279 aaKnown RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 ALDH1A2O94788 518 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 AKAP5P24588 427 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 MAGEA6P43360 314 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 LRP8Q14114 963 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ZNF773Q6PK81 442 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 PARP8Q8N3A8 854 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 MINDY2Q8NBR6 621 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 SCYL1Q96KG9 808 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ADPGKQ9BRR6 497 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 ZNF518BQ9C0D4 1074 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 TASP1Q9H6P5 420 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 RMND5AQ9H871 391 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 AKIP1Q9NQ31 210 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 OXSMQ9NWU1 459 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 MAGED2Q9UNF1 606 aaPredicted RBP16.86■□□□□ 0.29
PMS1-213ENST00000441310 GPSM3Q9Y4H4 160 aa16.86■□□□□ 0.29
PMS1-213ENST00000441310 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 MRASO14807 208 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 FASP25445 335 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 TRIM32Q13049 653 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 PRKAA1Q13131 559 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 STX5Q13190 355 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 PRPSAP1Q14558 356 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 CCNYL2Q5T2Q4 361 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 STRA8Q7Z7C7 330 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 DDIASQ8IXT1 998 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 CMTR2Q8IYT2 770 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 RTP4Q96DX8 246 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 TMEM176AQ96HP8 235 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 CENPOQ9BU64 300 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 SEZ6LQ9BYH1 1024 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 CNGB3Q9NQW8 809 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 DHRS12A0PJE2 317 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 SRP72O76094 671 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 MT-ND1P03886 318 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 BEX3Q00994 111 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 FAM102AQ5T9C2 384 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms