RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SQLEQ14534 574 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 TMEM132DQ14C87 1099 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 FAM45BPQ6NSW5 357 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 C8orf82Q6P1X6 216 aaPredicted RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 HACD2Q6Y1H2 254 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 DPH6Q7L8W6 267 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 FAM45AQ8TCE6 357 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 RAET1EQ8TD07 263 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 WNT8BQ93098 351 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 FEM1CQ96JP0 617 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
LTBR-203ENST00000441074 TSNARE1Q96NA8 513 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 AGAP2Q99490 1192 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 C1QTNF1Q9BXJ1 281 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 MUC3BQ9H195 1237 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 NANOGQ9H9S0 305 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 CROTQ9UKG9 612 aa11.97□□□□□ -0.49
LTBR-203ENST00000441074 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 SPTLC1O15269 473 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 IGHA2P01877 340 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 PABPC1P11940 636 aaKnown RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 JUNBP17275 347 aaPredicted RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 SCNN1AP37088 669 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 GRIA3P42263 894 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 HLCSP50747 726 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 CACNB2Q08289 660 aaPredicted RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 ATP6AP1Q15904 470 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 THOC7Q6I9Y2 204 aaKnown RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 NEPROQ6NW34 567 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 CATSPER4Q7RTX7 472 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 SPRED1Q7Z699 444 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 HMGCLL1Q8TB92 370 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 STYXQ8WUJ0 223 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 ZNF669Q96BR6 464 aaPredicted RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 NXF3Q9H4D5 531 aaKnown RBP11.96□□□□□ -0.49
LTBR-203ENST00000441074 AGPAT4Q9NRZ5 378 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 SNTG2Q9NY99 539 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 KLK14Q9P0G3 267 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 TLK1Q9UKI8 766 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 CPQQ9Y646 472 aa11.96□□□□□ -0.49
LTBR-203ENST00000441074 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 AQP12BA6NM10 295 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 SRP72O76094 671 aaKnown RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 CTSHP09668 335 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 MATN1P21941 496 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 GRM5P41594 1212 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 CPT1AP50416 773 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 TNK2Q07912 1038 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 FASTKQ14296 549 aaKnown RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 PKDCCQ504Y2 493 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 AGKQ53H12 422 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 TBCELQ5QJ74 424 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 NCBP2-AS2Q69YL0 99 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 TMEM135Q86UB9 458 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 AQP12AQ8IXF9 295 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 MINDY2Q8NBR6 621 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 CYGBQ8WWM9 190 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 MCMBPQ9BTE3 642 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 HGH1Q9BTY7 390 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 GPN2Q9H9Y4 310 aaPredicted RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 PKD2L2Q9NZM6 624 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 SFMBT1Q9UHJ3 866 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 DAPK2Q9UIK4 370 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ZCWPW2A0A1B0GU75 182 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 DYTNA2CJ06 578 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 TARM1B6A8C7 271 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 RNF103O00237 685 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 MRASO14807 208 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 PPEF2O14830 753 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 PFDN6O15212 129 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 DLX3O60479 287 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 NPHS1O60500 1241 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 RASAL1O95294 804 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 SNRPB2P08579 225 aaKnown RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 AKR1A1P14550 325 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ATP6V1B2P21281 511 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 IL10P22301 178 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 DNAJB1P25685 340 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 NFKBIAP25963 317 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 PSMB4P28070 264 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 CAPGP40121 348 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ABCG1P45844 678 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ADAM17P78536 824 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 TUBA3CQ13748 450 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 NEDD8Q15843 81 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ANO4Q32M45 955 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 DHRSXQ8N5I4 330 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 GOLM1Q8NBJ4 401 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms