RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 UMPSP11172 480 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 MAZP56270 477 aaKnown RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ALFQ53S48 1182 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 REP15Q6BDI9 236 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 SLC34A3Q8N130 599 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ZNF781Q8N8C0 355 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 NMRK2Q9NPI5 230 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ACSS2Q9NR19 701 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 DNAJC11Q9NVH1 559 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PRMT7Q9NVM4 692 aaPredicted RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 HOXC10Q9NYD6 342 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PADI4Q9UM07 663 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 GTF2A1LQ9UNN4 478 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ERVK-11Q9UQG0 969 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 CRYL1Q9Y2S2 319 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 TRAF6Q9Y4K3 522 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 SIGLEC16A6NMB1 481 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 C9P02748 559 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 MMP10P09238 476 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 POLD2P49005 469 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 BCAT1P54687 386 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 RELAQ04206 551 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 IER5Q5VY09 327 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ZNF517Q6ZMY9 492 aaPredicted RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 CUZD1Q86UP6 607 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 ZFP28Q8NHY6 868 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 C1GALT1C1Q96EU7 318 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 RNF157Q96PX1 679 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PKP2Q99959 881 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PCDHAC1Q9H158 963 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 MUC13Q9H3R2 512 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 CCDC177Q9NQR7 707 aaPredicted RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 PTBP2Q9UKA9 531 aaKnown RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.46□□□□□ -0.733e-8■■■■■ 40.8
PKNOX1-203ENST00000432907 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 CNTNAP4Q9C0A0 1308 aa10.46□□□□□ -0.73
PKNOX1-203ENST00000432907 AZIN1O14977 448 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 MDM4O15151 490 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 IFNA7P01567 189 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 SERPINF2P08697 491 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 CLTBP09497 229 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 SDC2P34741 201 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ANXA11P50995 505 aaKnown RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 VBP1P61758 197 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 RNASEH2BQ5TBB1 312 aaKnown RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 FBXO33Q7Z6M2 555 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ADGRA1Q86SQ6 560 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 SPATA2LQ8IUW3 424 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 POF1BQ8WVV4 589 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 TP53INP1Q96A56 240 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 PCDHB18PQ96TA0 734 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 NT5MQ9NPB1 228 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 MCUBQ9NWR8 336 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 DDX43Q9NXZ2 648 aaKnown RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ARHGAP28Q9P2N2 729 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 FUOMA2VDF0 154 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ECE2O60344 883 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 PLIN3O60664 434 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 CHRNGP07510 517 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 FDX1P10109 184 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 CDH1P12830 882 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 VEGFAP15692 232 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ACO1P21399 889 aaKnown RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 OXCT1P55809 520 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 EMC10Q5UCC4 262 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 SCIMPQ6UWF3 145 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ANKS1BQ7Z6G8 1248 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 EEF1AKMT1Q8WVE0 214 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 C1orf21Q9H246 121 aa10.46□□□□□ -0.74
PKNOX1-203ENST00000432907 TSPAN3O60637 253 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SLC22A3O75751 556 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 LINC00032P0C843 101 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SLC2A3P11169 496 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 ARF5P84085 180 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 VPS26BQ4G0F5 336 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 CHMP1BQ7LBR1 199 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 POP5Q969H6 163 aaKnown RBP10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 C11orf24Q96F05 449 aaPredicted RBP10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 TBL1YQ9BQ87 522 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 HEPHQ9BQS7 1158 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 YTHDF1Q9BYJ9 559 aaKnown RBP10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SLC22A4Q9H015 551 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 PIGUQ9H490 435 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 CATSPERZQ9NTU4 200 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 ARHGEF33A8MVX0 844 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SNX4O95219 450 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 PRKACBP22694 351 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SLC15A1P46059 708 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 TUBP50607 506 aa10.45□□□□□ -0.74
PKNOX1-203ENST00000432907 SLC18A1P54219 525 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms