RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 LPCAT4Q643R3 524 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 TICAM1Q8IUC6 712 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 BANPQ8N9N5 519 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 ADCY4Q8NFM4 1077 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 FGF13Q92913 245 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 SRPK1Q96SB4 655 aaKnown RBP11.51□□□□□ -0.57
CECR3-201ENST00000428828 RBM15Q96T37 977 aaKnown RBP eCLIP11.51□□□□□ -0.57
CECR3-201ENST00000428828 DHRS4Q9BTZ2 278 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
CECR3-201ENST00000428828 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 TKTL2Q9H0I9 626 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 WDCPQ9H6R7 721 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 CCL26Q9Y258 94 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 TLR6Q9Y2C9 796 aa11.51□□□□□ -0.57
CECR3-201ENST00000428828 TXNDC9O14530 226 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PAPLNO95428 1278 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PRAMEF12O95522 483 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 F9P00740 461 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 APOEP02649 317 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 THRAP10827 490 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 MYL2P10916 166 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ADRA1DP25100 572 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ENTPD1P49961 510 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ZXDBP98169 803 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 SLC25A11Q02978 314 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 SPCS2Q15005 226 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ACAP1Q15027 740 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 BNIPLQ7Z465 357 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 KBTBD6Q86V97 674 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 C4orf33Q8N1A6 199 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ZSCAN18Q8TBC5 510 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 ACTRT2Q8TDY3 377 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 WBP2Q969T9 261 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 DCUN1D1Q96GG9 259 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PRR11Q96HE9 360 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 FCRL2Q96LA5 508 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 RANBP9Q96S59 729 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 MAK16Q9BXY0 300 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 MAGEB5Q9BZ81 275 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 DCLK3Q9C098 648 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ANLNQ9NQW6 1124 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PSMD13Q9UNM6 376 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 CARD8Q9Y2G2 431 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 SNX10Q9Y5X0 201 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ALOX15BO15296 676 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 ENDOD1O94919 500 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 OLFM2O95897 454 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 SERPINA6P08185 405 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 TSHRP16473 764 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 KRT4P19013 534 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 DDX6P26196 483 aaKnown RBP eCLIP11.5□□□□□ -0.57
CECR3-201ENST00000428828 CCR1P32246 355 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 MTHFRP42898 656 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 RXRGP48443 463 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 CXCR3P49682 368 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 CCNG2Q16589 344 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 LPCAT2Q7L5N7 544 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 LRRC49Q8IUZ0 686 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 RHOT1Q8IXI2 618 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 PYROXD2Q8N2H3 581 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 TERB1Q8NA31 727 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 RAB3IL1Q8TBN0 382 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 HLA-CQ95604 372 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 CTRCQ99895 268 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 SNRNP25Q9BV90 132 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 KLF16Q9BXK1 252 aaPredicted RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 NUF2Q9BZD4 464 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 STN1Q9H668 368 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 CLK4Q9HAZ1 481 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
CECR3-201ENST00000428828 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 XPO7Q9UIA9 1087 aaKnown RBP11.5□□□□□ -0.57
CECR3-201ENST00000428828 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 MIA3Q5JRA6 1907 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 COL6A3P12111 3177 aa11.5□□□□□ -0.57
CECR3-201ENST00000428828 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 PI4K2BG5E9Z4 385 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 I6L893 689 aaPredicted RBP11.49□□□□□ -0.57
CECR3-201ENST00000428828 STC2O76061 302 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 CRTAMO95727 393 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 KRT1P04264 644 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
CECR3-201ENST00000428828 ETV4P43268 484 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 OVGP1Q12889 678 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 LLGL1Q15334 1064 aa11.49□□□□□ -0.57
CECR3-201ENST00000428828 CNGA3Q16281 694 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms