RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PARD6BQ9BYG5 372 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PCDHGA1Q9Y5H4 931 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TRDMT1O14717 391 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 ARP10275 920 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MAPTP10636 758 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 PTPRAP18433 802 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 POLD2P49005 469 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TTPAP49638 278 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SMAD3P84022 425 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 HSPA14Q0VDF9 509 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 GALNT3Q14435 633 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 CCDC116Q8IYX3 515 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SLC2A14Q8TDB8 520 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MYLPFQ96A32 169 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 RAD51AP1Q96B01 352 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SAMD11Q96NU1 681 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 UGT2B28Q9BY64 529 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PLEKHA1Q9HB21 404 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ABCB6Q9NP58 842 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SPATA2Q9UM82 520 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ST3GAL5Q9UNP4 418 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 C1orf232A0A0U1RR37 186 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TMEM238LA0A1B0GVL6 79 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRIM49D1C9J1S8 452 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 WNT10BO00744 389 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TSPAN1O60635 241 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TMEM11P17152 192 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CDH5P33151 784 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 SREBF1P36956 1147 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 BUD31P41223 144 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 CPA2P48052 419 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 RPS6KA3P51812 740 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 RAB25P57735 213 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CCNIQ14094 377 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NECTIN1Q15223 517 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 C15orf59Q2T9L4 293 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 ZNF605Q86T29 641 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 KCNMB4Q86W47 210 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 C4orf33Q8N1A6 199 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ETNPPLQ8TBG4 499 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 METTL6Q8TCB7 284 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SELENOMQ8WWX9 145 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 HAVCR1Q96D42 359 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ZNF607Q96SK3 696 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 FAM118BQ9BPY3 351 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SDHAF3Q9NRP4 125 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 BLOC1S4Q9NUP1 217 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TDP1Q9NUW8 608 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 AMACRQ9UHK6 382 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 PSMD13Q9UNM6 376 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 AKAP8O43823 692 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 BAIAP3O94812 1187 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TCEA1P23193 301 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 CDH13P55290 713 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SOX10P56693 466 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 IL5RAQ01344 420 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NDUFA5Q16718 116 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CCDC153Q494R4 210 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 FAM91A1Q658Y4 838 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TUBA3EQ6PEY2 450 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 IL27RAQ6UWB1 636 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NYAP1Q6ZVC0 841 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NIPA1Q7RTP0 329 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 C17orf64Q86WR6 236 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TDRPQ86YL5 185 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 HPS6Q86YV9 775 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 FAM13CQ8NE31 585 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 OR8H1Q8NGG4 311 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 PNPLA2Q96AD5 504 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CPNE1Q99829 537 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ROPN1BQ9BZX4 212 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 FAM192AQ9GZU8 254 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ROPN1Q9HAT0 212 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 MID1IP1Q9NPA3 183 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CBY1Q9Y3M2 126 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 LOC100653049A0A140TA62 436 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 PPP1R3GB7ZBB8 358 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRAFD1O14545 582 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRAPPC6AO75865 159 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SYNGR4O95473 234 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 FOSL2P15408 326 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SYN1P17600 705 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 PGAM1P18669 254 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 GDI1P31150 447 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 HNF4AP41235 474 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 KCNA10Q16322 511 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ZSWIM7Q19AV6 140 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 EPC2Q52LR7 807 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ANXA8L1Q5VT79 327 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 LIN54Q6MZP7 749 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TTI2Q6NXR4 508 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CATSPERGQ6ZRH7 1159 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ARMC8Q8IUR7 673 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 DAW1Q8N136 415 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 MAGEE2Q8TD90 523 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 AP2M1Q96CW1 435 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CATSPER2Q96P56 530 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 GAL3ST4Q96RP7 486 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms