RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MYLK2Q9H1R3 596 aa15.11■□□□□ 0.01
CALD1-206ENST00000424922 RFPL1O75677 317 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 CES1P23141 567 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 SP100P23497 879 aaPredicted RBP15.1■□□□□ 0.01
CALD1-206ENST00000424922 CDK18Q07002 472 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 NSUN2Q08J23 767 aaKnown RBP eCLIP15.1■□□□□ 0.01
CALD1-206ENST00000424922 FCHO2Q0JRZ9 810 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 POU6F1Q14863 301 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 ZNF449Q6P9G9 518 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 CES3Q6UWW8 571 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 YAF2Q8IY57 180 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 FAM111AQ96PZ2 611 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 SRPK1Q96SB4 655 aaKnown RBP15.1■□□□□ 0.01
CALD1-206ENST00000424922 HPS4Q9NQG7 708 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 FBXO10Q9UK96 956 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 PLLPQ9Y342 182 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 PRUNE2Q8WUY3 3088 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 COL4A3Q01955 1670 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 LOC285095A0A1B0GVY8 99 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 H3BQ06 376 aaPredicted RBP15.1■□□□□ 0.01
CALD1-206ENST00000424922 PSMC3P17980 439 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 SERPINB4P48594 390 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 DGKGP49619 791 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 ECT2LQ008S8 904 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 DMC1Q14565 340 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 GEN1Q17RS7 908 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 SIRPB2Q5JXA9 342 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 TMEM215Q68D42 235 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 MBLAC2Q68D91 279 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 AHI1Q8N157 1196 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 RAB3IL1Q8TBN0 382 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 ELSPBP1Q96BH3 223 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 TSSK1BQ9BXA7 367 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 IQCGQ9H095 443 aaKnown RBP15.1■□□□□ 0.01
CALD1-206ENST00000424922 ARNT2Q9HBZ2 717 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 CHRAC1Q9NRG0 131 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 SLC25A13Q9UJS0 675 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 RPS6KL1Q9Y6S9 549 aa15.1■□□□□ 0.01
CALD1-206ENST00000424922 MYO10Q9HD67 2058 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 TULP3O75386 442 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 POLBP06746 335 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 CISD3P0C7P0 127 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 SRCP12931 536 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
CALD1-206ENST00000424922 CRYMQ14894 314 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 DBN1Q16643 649 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 DGKKQ5KSL6 1271 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 TRMT10BQ6PF06 316 aaKnown RBP15.09■□□□□ 0.01
CALD1-206ENST00000424922 NLRP9Q7RTR0 991 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 KIAA0907Q7Z7F0 614 aaPredicted RBP15.09■□□□□ 0.01
CALD1-206ENST00000424922 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.09■□□□□ 0.01
CALD1-206ENST00000424922 ACMSDQ8TDX5 336 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 INPP5DQ92835 1189 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 ERP27Q96DN0 273 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 FEM1CQ96JP0 617 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 RPP25Q9BUL9 199 aaKnown RBP15.09■□□□□ 0.01
CALD1-206ENST00000424922 TNKS2Q9H2K2 1166 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 CD207Q9UJ71 328 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 HS3ST2Q9Y278 367 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 PCDHGC4Q9Y5F7 938 aa15.09■□□□□ 0.01
CALD1-206ENST00000424922 MAGEB16A2A368 324 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 CCDC78A2IDD5 438 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 WDR91A4D1P6 747 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 ANKRD33BA6NCL7 494 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 ZNF821O75541 412 aaPredicted RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 ATXN1LP0C7T5 689 aaKnown RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 CRHR1P34998 444 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 SLC6A11P48066 632 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 MNAT1P51948 309 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 KCNJ2P63252 427 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 IRX1P78414 480 aaPredicted RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 SULT2A1Q06520 285 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 GALNT3Q14435 633 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 SLC14A2Q15849 920 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 GAB4Q2WGN9 574 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 NCEH1Q6PIU2 408 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 METTL3Q86U44 580 aaKnown RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 ETFBKMTQ8IXQ9 262 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 UNC5BQ8IZJ1 945 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 OR6K2Q8NGY2 324 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 SORCS1Q8WY21 1168 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 PTPRN2Q92932 1015 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 NECTIN4Q96NY8 510 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 FCRL3Q96P31 734 aaPredicted RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 LRMDAQ9H2I8 198 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 C12orf65Q9H3J6 166 aaKnown RBP15.08■□□□□ 0.01
CALD1-206ENST00000424922 SAR1AQ9NR31 198 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 GTSE1Q9NYZ3 720 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 SLCO3A1Q9UIG8 710 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 SOX13Q9UN79 622 aa15.08■□□□□ 0.01
CALD1-206ENST00000424922 CXorf51AA0A1B0GTR3 108 aa15.08■□□□□ 0
CALD1-206ENST00000424922 FAM237BA0A1B0GVD1 139 aa15.08■□□□□ 0
CALD1-206ENST00000424922 HNRNPCL1O60812 293 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms