RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NUDT14O95848 222 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 NR2F6P10588 404 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PTPN3P26045 913 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SHMT1P34896 483 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 BACE1P56817 501 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 BCL2L1Q07817 233 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ARMC12Q5T9G4 340 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF280DQ6N043 979 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CDK5RAP1Q96SZ6 601 aaKnown RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF670Q9BS34 389 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PRDM12Q9H4Q4 367 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PNPLA8Q9NP80 782 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 EFR3BQ9Y2G0 817 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 POLR3HQ9Y535 204 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 FGRP09769 529 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 NTSP30990 170 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 GLYATQ6IB77 296 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CBR4Q8N4T8 237 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 MAGEB10Q96LZ2 347 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 FAM47E-STBD1D6RA91 191 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SUV39H1O43463 412 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CYP2A13Q16696 494 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 PGAM4Q8N0Y7 254 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CLDN25C9JDP6 229 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 OMPP47874 163 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SMIM11AP58511 58 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ARPC4P59998 168 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 GMFBP60983 142 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 MADCAM1Q13477 382 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 DLG2Q15700 870 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 C16orf59Q7L2K0 433 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 B3GALT6Q96L58 329 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 PGLYRP2Q96PD5 576 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CIDEBQ9UHD4 219 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ARHGEF33A8MVX0 844 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SGTAO43765 313 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 OTCP00480 354 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CCNFP41002 786 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CYP4F8P98187 520 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 NRG1Q02297 640 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 HSPA14Q0VDF9 509 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 SLC27A1Q6PCB7 646 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 HAS1Q92839 578 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 TMEM169Q96HH4 297 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 TSPAN4O14817 238 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 AP2A2O94973 939 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 THRBP10828 461 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 BDNFP23560 247 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 IGFBP5P24593 272 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 CTSKP43235 329 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ACOX1Q15067 660 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 PTPN20Q4JDL3 420 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 ERICH5Q6P6B1 374 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 KCTD8Q6ZWB6 473 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 RBM4BQ9BQ04 359 aaKnown RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 RBM4Q9BWF3 364 aaKnown RBP12.39□□□□□ -0.43
CLCN4-203ENST00000421085 BPIFA1Q9NP55 256 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
CLCN4-203ENST00000421085 FGF10O15520 208 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 OR5F1O95221 314 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 RPS9P46781 194 aaKnown RBP12.38□□□□□ -0.43
CLCN4-203ENST00000421085 PPIL2Q13356 520 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GALNT3Q14435 633 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GPAT3Q53EU6 434 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TXNDC11Q6PKC3 985 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 FRMD7Q6ZUT3 714 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 DET1Q7L5Y6 550 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TEX47Q8TBZ9 253 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 NXNL1Q96CM4 212 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 DIRAS2Q96HU8 199 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ZNHIT2Q9UHR6 403 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 ITGA3P26006 1051 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CCR4P51679 360 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TPTEP56180 551 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 GTF2BQ00403 316 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CCL15Q16663 113 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CA9Q16790 459 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 HKDC1Q2TB90 917 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 RALGPS1Q5JS13 557 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 CD101Q93033 1021 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 TLCD1Q96CP7 247 aa12.38□□□□□ -0.43
CLCN4-203ENST00000421085 COPS4Q9BT78 406 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms