RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ASB12Q8WXK4 309 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 MCCC1Q96RQ3 725 aaPredicted RBP20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 OSBPL9Q96SU4 736 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 TMEM121Q9BTD3 319 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 CAPN10Q9HC96 672 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 SLC6A14Q9UN76 642 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 ZKSCAN5Q9Y2L8 839 aa20.74■□□□□ 0.91
HMGXB4-203ENST00000420166 C5orf60A6NFR6 353 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 F5H423 210 aaPredicted RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 PRAMEF26H0Y7S4 382 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 FOXD2O60548 495 aaPredicted RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 HNRNPA2B1P22626 353 aaKnown RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 LIG3P49916 1009 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 AFF3P51826 1226 aaKnown RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 IRX4P78413 519 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 SGCGQ13326 291 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 CCNG2Q16589 344 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 NDUFAF2Q8N183 169 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 C12orf50Q8NA57 414 aaPredicted RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 CCDC110Q8TBZ0 833 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 COG1Q8WTW3 980 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 SCRN2Q96FV2 425 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 TRIB3Q96RU7 358 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 NUSAP1Q9BXS6 441 aaKnown RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 AASDHPPTQ9NRN7 309 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 UBP1Q9NZI7 540 aa20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 TTC7AQ9ULT0 858 aaPredicted RBP20.73■□□□□ 0.91
HMGXB4-203ENST00000420166 A0A0J9YYE9 177 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 NPIPB15A6NHN6 443 aaPredicted RBP20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 CES2O00748 559 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 WNT9AO14904 365 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 PMPCBO75439 489 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 TM7SF2O76062 418 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 TRBC1P01850 177 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 CYP2A6P11509 494 aaPredicted RBP20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 C6P13671 934 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 CTPS1P17812 591 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 AKT2P31751 481 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 VIPR1P32241 457 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 GRIA4P48058 902 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 CSNK1EP49674 416 aaKnown RBP20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 GDF10P55107 478 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 SNX1Q13596 522 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 TEAD4Q15561 434 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 PCSK7Q16549 785 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 KDELC1Q6UW63 502 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 LIPIQ6XZB0 460 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 TMEM145Q8NBT3 493 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 RTP4Q96DX8 246 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 OXNAD1Q96HP4 312 aaPredicted RBP20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 MS4A14Q96JA4 679 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 MYOCQ99972 504 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 ADGRE3Q9BY15 652 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 FZD3Q9NPG1 666 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 DMDP11532 3685 aa20.72■□□□□ 0.91
HMGXB4-203ENST00000420166 USP34Q70CQ2 3546 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 A0A1W2PR77 199 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 CAPN8A6NHC0 703 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 A8MX80 341 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 PGRMC1O00264 195 aaKnown RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 GCATO75600 419 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 PAK4O96013 591 aaPredicted RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 ALPIP09923 528 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 ELFN1P0C7U0 828 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 TCP1P17987 556 aaKnown RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 LHCGRP22888 699 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 PSMB4P28070 264 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 STIP1P31948 543 aaKnown RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 WNT3AP56704 352 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 CDK18Q07002 472 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 PTPRRQ15256 657 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 QPCTQ16769 361 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 DRICH1Q6PGQ1 229 aaPredicted RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 LAYNQ6UX15 382 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 KDELC2Q7Z4H8 507 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 KIAA2013Q8IYS2 634 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 IFT43Q96FT9 208 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 LENG8Q96PV6 779 aaPredicted RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 SMIM14Q96QK8 99 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 NAPGQ99747 312 aaPredicted RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 GORASP1Q9BQQ3 440 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 FSCN3Q9NQT6 498 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 ZNF148Q9UQR1 794 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 CA5BQ9Y2D0 317 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 COQ6Q9Y2Z9 468 aa20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.71■□□□□ 0.91
HMGXB4-203ENST00000420166 A0A1B0GVT2 93 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 LNP1A1A4G5 178 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 VILLO15195 856 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 RAD51BO15315 384 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 ANXA9O76027 345 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 HEXIM1O94992 359 aaKnown RBP20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 NDST3O95803 873 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 WNT1P04628 370 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 ITGAVP06756 1048 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 CD38P28907 300 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 HNF1BP35680 557 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 GEMP55040 296 aa20.7■□□□□ 0.9
HMGXB4-203ENST00000420166 MPP3Q13368 585 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms