RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ACLYP53396 1101 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PPP3CAQ08209 521 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TMED2Q15363 201 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SIX1Q15475 284 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 HADHQ16836 314 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 AADACL2Q6P093 401 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ABHD17CQ6PCB6 329 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 GJB7Q6PEY0 223 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 BLOC1S3Q6QNY0 202 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SZRD1Q7Z422 152 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TTC7BQ86TV6 843 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ZBTB8OSQ8IWT0 167 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SULF2Q8IWU5 870 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ZDHHC14Q8IZN3 488 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 LILRB4Q8NHJ6 448 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 NAT14Q8WUY8 206 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PTCD3Q96EY7 689 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 AGPAT1Q99943 283 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 MSTO1Q9BUK6 570 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PSME2Q9UL46 239 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 USP3Q9Y6I4 520 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TSPAN9O75954 239 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PIM1P11309 404 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 HNF1BP35680 557 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 HAAOP46952 286 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 KCNJ1P48048 391 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 VCPP55072 806 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 HDAC4P56524 1084 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 RPL26P61254 145 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 SGO2Q562F6 1265 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ZNF574Q6ZN55 896 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 OTOAQ7RTW8 1153 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 CD101Q93033 1021 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 GFM2Q969S9 779 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 VPS33AQ96AX1 596 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PHF12Q96QT6 1004 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ECSITQ9BQ95 431 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ADAMTS10Q9H324 1103 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 TRABDQ9H4I3 376 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 ATAD3AQ9NVI7 634 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 CAMK2AQ9UQM7 478 aa9.47□□□□□ -0.89
SNHG3-201ENST00000413987 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 MTO1Q9Y2Z2 717 aaKnown RBP9.47□□□□□ -0.89
SNHG3-201ENST00000413987 MEIS3P2A8K0S8 358 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 PITPNM1O00562 1244 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 CLDN3O15551 220 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 SCGB1D1O95968 90 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 ZCCHC18P0CG32 403 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.89
SNHG3-201ENST00000413987 JUNDP17535 347 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 IL10P22301 178 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 CETN2P41208 172 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 PHKA2P46019 1235 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 RABIFP47224 123 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 LBX1P52954 281 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 UBE3AQ05086 875 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 RPA4Q13156 261 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 TFDP1Q14186 410 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 ATF7IP2Q5U623 682 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 ACAD11Q709F0 780 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 USP45Q70EL2 814 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 R3HCC1LQ7Z5L2 792 aaKnown RBP9.46□□□□□ -0.89
SNHG3-201ENST00000413987 NET1Q7Z628 596 aaPredicted RBP9.46□□□□□ -0.89
SNHG3-201ENST00000413987 ARL14Q8N4G2 192 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 EFHBQ8N7U6 833 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 TUBGCP5Q96RT8 1024 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 THUMPD3Q9BV44 507 aaKnown RBP9.46□□□□□ -0.89
SNHG3-201ENST00000413987 OSBPL8Q9BZF1 889 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 CD244Q9BZW8 370 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 RNF208Q9H0X6 261 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 FZD8Q9H461 694 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 OCEL1Q9H607 264 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 SLCO1B3Q9NPD5 702 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 PTTG2Q9NZH5 202 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 CNOT6Q9ULM6 557 aaKnown RBP9.46□□□□□ -0.89
SNHG3-201ENST00000413987 HES2Q9Y543 173 aa9.46□□□□□ -0.89
SNHG3-201ENST00000413987 FRMPD3Q5JV73 1810 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 A0A1W2PQ45 241 aaPredicted RBP9.46□□□□□ -0.9
SNHG3-201ENST00000413987 A0A1W2PQY0 241 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 FAM86C2PA6NEL3 165 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 TP73O15350 636 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 FAM189A1O60320 539 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 CIB2O75838 187 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 CYP1A1P04798 512 aaPredicted RBP9.46□□□□□ -0.9
SNHG3-201ENST00000413987 ITGA2BP08514 1039 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 IVDP26440 423 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 HOXC8P31273 242 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 ADCY8P40145 1251 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 VAMP7P51809 220 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 EFNA5P52803 228 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 RAB15P59190 212 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 ARHGAP8P85298 464 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms