RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 BECN1Q14457 450 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 WDR59Q6PJI9 974 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 SLFN11Q7Z7L1 901 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 DTX1Q86Y01 620 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 SLITRK4Q8IW52 837 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 USP7Q93009 1102 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 PDFQ9HBH1 243 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
RAB5A-202ENST00000412966 MRPL40Q9NQ50 206 aaKnown RBP13.79□□□□□ -0.2
RAB5A-202ENST00000412966 SUV39H1O43463 412 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 KRT3P12035 628 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 GM2AP17900 193 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 GPD1P21695 349 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 RGRP47804 291 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 KLK7P49862 253 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 CYP4F2P78329 520 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 RALGDSQ12967 914 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 HLTFQ14527 1009 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAB5A-202ENST00000412966 TBR1Q16650 682 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 PARP15Q460N3 678 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 C14orf28Q4W4Y0 310 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 MANEAQ5SRI9 462 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 BRAT1Q6PJG6 821 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 TAF8Q7Z7C8 310 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 UMODL1-AS1Q8N2C9 162 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 PELI3Q8N2H9 469 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 FAM46DQ8NEK8 389 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 CCL4L1Q8NHW4 92 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 ARHGAP9Q9BRR9 750 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 TMEM168Q9H0V1 697 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 SAMSN1Q9NSI8 373 aaKnown RBP13.78□□□□□ -0.2
RAB5A-202ENST00000412966 LRIT1Q9P2V4 623 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
RAB5A-202ENST00000412966 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 RELNP78509 3460 aa13.78□□□□□ -0.2
RAB5A-202ENST00000412966 NBASA2RRP1 2371 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 B4DGG1 531 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 J3KR12 359 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 EPHB6O15197 1021 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 CCP110O43303 1012 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 CREB3O43889 395 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 RECQL5O94762 991 aaPredicted RBP13.77□□□□□ -0.21
RAB5A-202ENST00000412966 MAPK10P53779 464 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 JAM2P57087 298 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 UBE2HP62256 183 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 B4GALNT1Q00973 533 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 GRM3Q14832 879 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 EFHC2Q5JST6 749 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 ERAP2Q6P179 960 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 LIPIQ6XZB0 460 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 ATG14Q6ZNE5 492 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 TMEM159Q96B96 161 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.21
RAB5A-202ENST00000412966 CMKLR1Q99788 373 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 FUCA2Q9BTY2 467 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 LGR4Q9BXB1 951 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 SEPT10Q9P0V9 454 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 FZD10Q9ULW2 581 aa13.77□□□□□ -0.21
RAB5A-202ENST00000412966 ZFC3H1O60293 1989 aaKnown RBP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 B4GAT1O43505 415 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 NUDT21O43809 227 aaKnown RBP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 PRAMEF11O60813 436 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 SOX5P35711 763 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TRIM23P36406 574 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 ARSDP51689 593 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAB5A-202ENST00000412966 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TCP11X2Q5H9J9 407 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 PHF19Q5T6S3 580 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TRIM72Q6ZMU5 477 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 ECHDC3Q96DC8 303 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 NSMCE3Q96MG7 304 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TUBGCP5Q96RT8 1024 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 SELENOOQ9BVL4 669 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 CATSPERBQ9H7T0 1116 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 RDH14Q9HBH5 336 aa13.76□□□□□ -0.21
RAB5A-202ENST00000412966 TAB2Q9NYJ8 693 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms