RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ABI3BPQ7Z7G0 1075 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 NLRP8Q86W28 1048 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ZSWIM9Q86XI8 627 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ZNF567Q8N184 647 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PAF1Q8N7H5 531 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PIH1D2Q8WWB5 315 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SERAC1Q96JX3 654 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SPATA13Q96N96 652 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 HERPUD2Q9BSE4 406 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 EDEM2Q9BV94 578 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SLC17A9Q9BYT1 436 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 CDH19Q9H159 772 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PCDH9Q9HC56 1237 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PARD6AQ9NPB6 346 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 GPR27Q9NS67 375 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 DNAAF2Q9NVR5 837 aaKnown RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 SEPT10Q9P0V9 454 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 KLHL8Q9P2G9 620 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 NFKBIL1Q9UBC1 381 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 SAE1Q9UBE0 346 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 FEZ2Q9UHY8 353 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 AAR2Q9Y312 384 aaKnown RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 TTLL3Q9Y4R7 772 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PCDHB9Q9Y5E1 797 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PCDHGC4Q9Y5F7 938 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PCDHGB2Q9Y5G2 931 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 PLXNA2O75051 1894 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 A0A1W2PR77 199 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 RGSL1A5PLK6 1076 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ERI2A8K979 691 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 FPGTO14772 594 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 GCATO75600 419 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 HEXIM1O94992 359 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 NDST3O95803 873 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CFIP05156 583 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ITGAVP06756 1048 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 C6P13671 934 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 PRLRP16471 622 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 TCP1P17987 556 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 RBL1P28749 1068 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CD68P34810 354 aaPredicted RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 ACTN2P35609 894 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CD86P42081 329 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CTSKP43235 329 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ATXN3P54252 364 aaPredicted RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 EPHB1P54762 984 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 C21orf59P57076 290 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 YPEL5P62699 121 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CDK18Q07002 472 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 NIPAL4Q0D2K0 466 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 RALGDSQ12967 914 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 GRIK2Q13002 908 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 MTM1Q13496 603 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ARHGEF7Q14155 803 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 PRPSAP1Q14558 356 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 STAT4Q14765 748 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 OASLQ15646 514 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 CCNG2Q16589 344 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ZNF423Q2M1K9 1284 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ANKRD20A2Q5SQ80 823 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ANKRD20A1Q5TYW2 823 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ANKRD20A3Q5VUR7 823 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ESRP1Q6NXG1 681 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 AADACL2Q6P093 401 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 DARS2Q6PI48 645 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 LIPIQ6XZB0 460 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ZNF765Q7L2R6 523 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 PID1Q7Z2X4 250 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 CBARPQ8N350 705 aaPredicted RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 SLC35F6Q8N357 371 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 DCLK2Q8N568 766 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 ATL2Q8NHH9 583 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 TBATAQ96M53 351 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 NSMCE3Q96MG7 304 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 AGAP3Q96P47 875 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 TRIB3Q96RU7 358 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 KLF6Q99612 283 aaPredicted RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 TRABDQ9H4I3 376 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 EBF2Q9HAK2 575 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 USP29Q9HBJ7 922 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 TMEM9BQ9NQ34 198 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 AASDHPPTQ9NRN7 309 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 RAD18Q9NS91 495 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 HACD3Q9P035 362 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 B4GALT6Q9UBX8 382 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 DRG1Q9Y295 367 aaKnown RBP8.25□□□□□ -1.09
RPE-204ENST00000411934 ZNF292O60281 2723 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 USP34Q70CQ2 3546 aa8.25□□□□□ -1.09
RPE-204ENST00000411934 LOC285095A0A1B0GVY8 99 aa8.24□□□□□ -1.09
RPE-204ENST00000411934 IGLON5A6NGN9 336 aa8.24□□□□□ -1.09
RPE-204ENST00000411934 ANKRD66B4E2M5 251 aa8.24□□□□□ -1.09
RPE-204ENST00000411934 PGRMC1O00264 195 aaKnown RBP8.24□□□□□ -1.09
RPE-204ENST00000411934 SLC30A4O14863 429 aa8.24□□□□□ -1.09
RPE-204ENST00000411934 KCNN4O15554 427 aa8.24□□□□□ -1.09
RPE-204ENST00000411934 PSMD3O43242 534 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms