RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	TTC39C	Q8N584	583 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	C12orf29	Q8N999	325 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	LINC01356	Q8N9X3	169 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PARD3B	Q8TEW8	1205 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	RNF139	Q8WU17	664 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SORCS1	Q8WY21	1168 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	BIRC7	Q96CA5	298 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CYFIP2	Q96F07	1278 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CNDP2	Q96KP4	475 aa	Known RBP	6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ZNF396	Q96N95	335 aa	Predicted RBP	6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	C7orf25	Q9BPX7	421 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	BRINP2	Q9C0B6	783 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SDCBP2	Q9H190	292 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CYP3A43	Q9HB55	503 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	GDF3	Q9NR23	364 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	AASDHPPT	Q9NRN7	309 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	OLA1	Q9NTK5	396 aa	Known RBP	6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	HMGXB4	Q9UGU5	601 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SUN2	Q9UH99	717 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	MCM8	Q9UJA3	840 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	FRMD4B	Q9Y2L6	1034 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ATP8A1	Q9Y2Q0	1164 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SCN1A	P35498	2009 aa		6.99	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SMG1	Q96Q15	3661 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461		A0A1B0GTQ1	180 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	FAM47DP	A6NHR8	397 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	LRRC72	A6NJI9	287 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	HHLA1	C9JL84	531 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	IKBKB	O14920	756 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	VILL	O15195	856 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SPTLC2	O15270	562 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PAPSS1	O43252	624 aa	Predicted RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TSPAN3	O60637	253 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ASS1	P00966	412 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	KLKB1	P03952	638 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PRB1	P04280	392 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	DLD	P09622	509 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CD58	P19256	250 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	POLR2E	P19388	210 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	LSP1	P33241	339 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ACTN2	P35609	894 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	EIF2S3	P41091	472 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	INCA1	Q0VD86	236 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ILK	Q13418	452 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	STAT4	Q14765	748 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TERF2	Q15554	542 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	HS1BP3	Q53T59	392 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TAF1B	Q53T94	588 aa	Predicted RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	USP30	Q70CQ3	517 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CHST9	Q7L1S5	443 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	SCD5	Q86SK9	330 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CEP57L1	Q8IYX8	460 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	STPG3	Q8N7X2	389 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ATL2	Q8NHH9	583 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CALML6	Q8TD86	181 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	FGF11	Q92914	225 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TMA16	Q96EY4	203 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	USP28	Q96RU2	1077 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	FOXB1	Q99853	325 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TACO1	Q9BSH4	297 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	BTBD2	Q9BX70	525 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	DUSP16	Q9BY84	665 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PRORY	Q9H606	182 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ZMAT4	Q9H898	229 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PCDH12	Q9NPG4	1184 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	KCND1	Q9NSA2	647 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ABCB8	Q9NUT2	735 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	EXOC1	Q9NV70	894 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ASCC3	Q8N3C0	2202 aa	Known RBP	6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	APC2	O95996	2303 aa		6.98	□□□□□ -1.29
CEACAM1-208	ENST00000403461	THADA	Q6YHU6	1953 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PCDH15	Q96QU1	1955 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461		A0A1W2PPC4	97 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	UBA6	A0AVT1	1052 aa	Predicted RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CALU	O43852	315 aa	Predicted RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	MAGEC1	O60732	1142 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CUTA	O60888	179 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PPP6R2	O75170	966 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ULK1	O75385	1050 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	RNASEH2A	O75792	299 aa	Known RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	VNN1	O95497	513 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	LATS1	O95835	1130 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	HLA-DRA	P01903	254 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	NR3C1	P04150	777 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	KRT13	P13646	458 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	PLA2G2A	P14555	144 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ZNF28	P17035	718 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	CD40	P25942	277 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TKTL1	P51854	596 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	UCN	P55089	124 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	YWHAG	P61981	247 aa	Known RBP eCLIP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	RPS14	P62263	151 aa	Known RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	ALDH6A1	Q02252	535 aa	Known RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	STIL	Q15468	1287 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	HES3	Q5TGS1	186 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	BROX	Q5VW32	411 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	RNF219	Q5W0B1	726 aa	Predicted RBP	6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	FAM173B	Q6P4H8	233 aa		6.97	□□□□□ -1.29
CEACAM1-208	ENST00000403461	LAYN	Q6UX15	382 aa		6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 338.6 ms