RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 SCIMPQ6UWF3 145 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 CUZD1Q86UP6 607 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF280BQ86YH2 543 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 DIS3LQ8TF46 1054 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 SNRNP27Q8WVK2 155 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 HIC2Q96JB3 615 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF512Q96ME7 567 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 NR1H4Q96RI1 486 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 SLX1AQ9BQ83 275 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 EFHD1Q9BUP0 239 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PIF1Q9H611 641 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MID1IP1Q9NPA3 183 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 STK39Q9UEW8 545 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 LRFN2Q9ULH4 789 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PSMD13Q9UNM6 376 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 WDR37Q9Y2I8 494 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 A0A087X1B8 175 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MRASO14807 208 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 HNRNPRO43390 633 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 GRID2O43424 1007 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 BNIP3LO60238 219 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 IPO13O94829 963 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ELNP15502 786 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 NELFEP18615 380 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 YWHAQP27348 245 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MTTPP55157 894 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MLLT6P55198 1093 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 TRIM32Q13049 653 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MAPRE2Q15555 327 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 NFE2Q16621 373 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PPP1R3AQ16821 1122 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 RAB41Q5JT25 222 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MORN1Q5T089 497 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MRNIPQ6NTE8 343 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 TAS2R42Q7RTR8 314 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 AMIGO2Q86SJ2 522 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MON1AQ86VX9 555 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ARHGAP12Q8IWW6 846 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 LGI2Q8N0V4 545 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 TRIML2Q8N7C3 387 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 OR9I1Q8NGQ6 314 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 SOCS4Q8WXH5 440 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 CCDC126Q96EE4 140 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 DCUN1D1Q96GG9 259 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 HAPLN3Q96S86 360 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PRPF18Q99633 342 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 CLIC5Q9NZA1 410 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 A0A0U1RQF3 1178 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 HHLA1C9JL84 531 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 ANGPT2O15123 496 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 KPNA6O60684 536 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SRP72O76094 671 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SEC24DO94855 1032 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SIX3O95343 332 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 HSPA8P11142 646 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 COL6A2P12110 1019 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 FMO4P31512 558 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PBX3P40426 434 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 TAF10Q12962 218 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 FUT11Q495W5 492 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SPOUT1Q5T280 376 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 TSTD2Q5T7W7 516 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 FAM219BQ5XKK7 198 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PTGR2Q8N8N7 351 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PGAP3Q96FM1 320 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 CYP2S1Q96SQ9 504 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SLC39A3Q9BRY0 314 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SLC25A51Q9H1U9 297 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 FBXO44Q9H4M3 255 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 FBRSL1Q9HCM7 1045 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SEMA4BQ9NPR2 832 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 BTRCQ9Y297 605 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 TRAF6Q9Y4K3 522 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 GOLGA4Q13439 2230 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 RNF103-CHMP3A0A140T963 221 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 MANSC4A6NHS7 340 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF195O14628 629 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PENKP01210 267 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 ALOX15P16050 662 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 CLCN5P51795 746 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 TMED1Q13445 227 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PABPC1LQ4VXU2 614 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 KIAA1841Q6NSI8 718 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 DCBLD1Q8N8Z6 715 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 OR13C4Q8NGS5 318 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 TRPC4APQ8TEL6 797 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 ESAMQ96AP7 390 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 DNAJC1Q96KC8 554 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PPP1R2P1Q96PQ5 205 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 OLFM1Q99784 485 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 RTP3Q9BQQ7 232 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 GIMAP2Q9UG22 337 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 PRPF19Q9UMS4 504 aaKnown RBP7.72□□□□□ -1.17
HDAC9-201ENST00000401921 ARL5AQ9Y689 179 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 SLC4A7Q9Y6M7 1214 aa7.72□□□□□ -1.17
HDAC9-201ENST00000401921 WDR90Q96KV7 1748 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms