RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MYBL2P10244 700 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PTPRAP18433 802 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 TFEBP19484 476 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PPM1AP35813 382 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 REM2Q8IYK8 340 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ZNF540Q8NDQ6 660 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PPTC7Q8NI37 304 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 UBASH3BQ8TF42 649 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 RASSF5Q8WWW0 418 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 VPS35Q96QK1 796 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ACE2Q9BYF1 805 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 NOL6Q9H6R4 1146 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 KIAA1522Q9P206 1035 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SH3GLB1Q9Y371 365 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PARP4Q9UKK3 1724 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 MEIS2O14770 477 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 B4GALT4O60513 344 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CDC25CP30307 473 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 MAPKAPK2P49137 400 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ZACNQ401N2 412 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 NOMO2Q5JPE7 1267 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 DENND5AQ6IQ26 1287 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 FBXO30Q8TB52 745 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PHF10Q8WUB8 498 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 KIFC1Q9BW19 673 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 S100A14Q9HCY8 104 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PSMD13Q9UNM6 376 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 MYO5BQ9ULV0 1848 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 KNDC1Q76NI1 1749 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 TAF4O00268 1085 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SUV39H1O43463 412 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PARNO95453 639 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PRG2P13727 222 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 RCVRNP35243 200 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SPIBQ01892 262 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 BST1Q10588 318 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 USP41Q3LFD5 358 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC26A9Q7LBE3 791 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ANKRD23Q86SG2 305 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 GPR180Q86V85 440 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 MINDY2Q8NBR6 621 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 HM13Q8TCT9 377 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 PLEKHG4BQ96PX9 1271 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CDT1Q9H211 546 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 GBA3Q9H227 469 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 BRD9Q9H8M2 597 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 TAS2R14Q9NYV8 317 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 STOML2Q9UJZ1 356 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 SCAF8Q9UPN6 1271 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 AP3D1O14617 1153 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 GRM6O15303 877 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 RPS6KA3P51812 740 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 BIKQ13323 160 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CAPSQ13938 189 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 IRF2BP2Q7Z5L9 587 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 COMMD2Q86X83 199 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ARMC8Q8IUR7 673 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CCDC36Q8IYA8 594 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 P2RX7Q99572 595 aaKnown RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CEP41Q9BYV8 373 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 GPN1Q9HCN4 374 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ASAH2Q9NR71 780 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 KCTD5Q9NXV2 234 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 CPA4Q9UI42 421 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
SPTLC3-201ENST00000399002 ITGAXP20702 1163 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 RAB2AP61019 212 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 ATP13A4Q4VNC1 1196 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 FAM180AQ6UWF9 173 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 OAFQ86UD1 273 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH24Q86UP0 819 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 LRRC17Q8N6Y2 441 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 C2orf15Q8WU43 125 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 NXF3Q9H4D5 531 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PLLPQ9Y342 182 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 TBL1XO60907 577 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 MTRF1O75570 445 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 ERCC2P18074 760 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PKNOX1P55347 436 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 RAB15P59190 212 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 TMEM44Q2T9K0 475 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 PYDC2Q56P42 97 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 XKR6Q5GH73 641 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 WSCD1Q658N2 575 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 BNIPLQ7Z465 357 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 OMA1Q96E52 524 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 ZHX1-C8orf76Q96EF9 292 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 MYO19Q96H55 970 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 DDX4Q9NQI0 724 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 DDX18Q9NVP1 670 aaKnown RBP8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 ING3Q9NXR8 418 aa8.38□□□□□ -1.07
SPTLC3-201ENST00000399002 HBS1LQ9Y450 684 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms