RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PCDHB9Q9Y5E1 797 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 HEY1Q9Y5J3 304 aa16.79■□□□□ 0.28
APTR-201ENST00000398043 MAP1BP46821 2468 aaKnown RBP16.78■□□□□ 0.28
APTR-201ENST00000398043 CEP295Q9C0D2 2601 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 PRLP01236 227 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 MMP2P08253 660 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 PDHA1P08559 390 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 KRT10P13645 584 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 ZFXP17010 805 aaPredicted RBP16.78■□□□□ 0.28
APTR-201ENST00000398043 CES1P23141 567 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
APTR-201ENST00000398043 IRF4Q15306 451 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 TFDP3Q5H9I0 405 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 DAAM2Q86T65 1068 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 RFX6Q8HWS3 928 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 RCOR2Q8IZ40 523 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 C1QTNF7Q9BXJ2 289 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 MAK16Q9BXY0 300 aaKnown RBP16.78■□□□□ 0.28
APTR-201ENST00000398043 B4GALT6Q9UBX8 382 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 KLF15Q9UIH9 416 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 PHTF1Q9UMS5 762 aa16.78■□□□□ 0.28
APTR-201ENST00000398043 GRID2IPA4D2P6 1211 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 KCNK1O00180 336 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 TOR1BO14657 336 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 PIAS2O75928 621 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 ZRANB2O95218 330 aaKnown RBP eCLIP16.77■□□□□ 0.28
APTR-201ENST00000398043 IPO7O95373 1038 aaKnown RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 CPP00450 1065 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 ITGAVP06756 1048 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 ATXN1LP0C7T5 689 aaKnown RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 FTH1P19P0C7X4 201 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 PECAM1P16284 738 aaPredicted RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 DGKAP23743 735 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 PEX5P50542 639 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 YPEL5P62699 121 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 EIF2B5Q13144 721 aaKnown RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 LRRC14Q15048 493 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 PDK1Q15118 436 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 PTPRRQ15256 657 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 FAM182AQ5T1J6 154 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 RAB44Q7Z6P3 723 aaPredicted RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 CCNYQ8ND76 341 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 EXD1Q8NHP7 514 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 SCRN2Q96FV2 425 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 COQ10AQ96MF6 247 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 UCKL1Q9NWZ5 548 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
APTR-201ENST00000398043 PCDHA3Q9Y5H8 950 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 RAI2Q9Y5P3 530 aa16.77■□□□□ 0.28
APTR-201ENST00000398043 NPIPB15A6NHN6 443 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 TNFSF14O43557 240 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 CST8O60676 142 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 SDC3O75056 442 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 RECQL5O94762 991 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 JCHAINP01591 159 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 CSF2P04141 144 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 NME1P15531 152 aaKnown RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 LHCGRP22888 699 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 CTNNA2P26232 953 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 NR2C2P49116 596 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 DYNLT1P63172 113 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 FOXC1Q12948 553 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 PDE1CQ14123 709 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 PRKD1Q15139 912 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 CNGA3Q16281 694 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 PPP2R5EQ16537 467 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 INAVAQ3KP66 663 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 ARMC12Q5T9G4 340 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 PARGQ86W56 976 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 EID2Q8N6I1 236 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 PLA2G15Q8NCC3 412 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 PDCD6IPQ8WUM4 868 aaKnown RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 ADAMTS14Q8WXS8 1223 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 TADA1Q96BN2 335 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 ZNF830Q96NB3 372 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 HERPUD2Q9BSE4 406 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 DESI2Q9BSY9 194 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 TDRD1Q9BXT4 1180 aaKnown RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 BRD8Q9H0E9 1235 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 TRIM10Q9UDY6 481 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 ANGPTL2Q9UKU9 493 aa16.76■□□□□ 0.27
APTR-201ENST00000398043 COL27A1Q8IZC6 1860 aaPredicted RBP16.76■□□□□ 0.27
APTR-201ENST00000398043 FAM221BA6H8Z2 402 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 A8MX80 341 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 HEXIM1O94992 359 aaKnown RBP16.75■□□□□ 0.27
APTR-201ENST00000398043 ELFN1P0C7U0 828 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 TGM2P21980 687 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 VIPR1P32241 457 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 SKOR1P84550 965 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 ITKQ08881 620 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 TFDP2Q14188 446 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 LLGL1Q15334 1064 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 ZNF542PQ5EBM4 170 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 BBS12Q6ZW61 710 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 NT5DC3Q86UY8 548 aa16.75■□□□□ 0.27
APTR-201ENST00000398043 PELI3Q8N2H9 469 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms