RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 OR2B2Q9GZK3 357 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 SAE1Q9UBE0 346 aaPredicted RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 PSME2Q9UL46 239 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PABPN1LA6NDY0 278 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 STX7O15400 261 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 YES1P07947 543 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 SERPINA6P08185 405 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 CHRM5P08912 532 aaPredicted RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 PRKAR2AP13861 404 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 CHRNB2P17787 502 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 PTPN1P18031 435 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 HNRNPFP52597 415 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 DRG2P55039 364 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 SESN2P58004 480 aaPredicted RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 GPR85P60893 370 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 RUNX1T1Q06455 604 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 STX5Q13190 355 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 CCNIQ14094 377 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 BTBD16Q32M84 506 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 AGKQ53H12 422 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 Q7L0L9 218 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 SLC9A9Q8IVB4 645 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 OTULINQ96BN8 352 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 BIRC7Q96CA5 298 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 TRIM15Q9C019 465 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 DIABLOQ9NR28 239 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 RAB6BQ9NRW1 208 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 KCNH7Q9NS40 1196 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 C14orf119Q9NWQ9 140 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 PIH1D1Q9NWS0 290 aaKnown RBP8.46□□□□□ -1.05
NDE1-202ENST00000396355 ANKMY1Q9P2S6 941 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 PCDHA3Q9Y5H8 950 aa8.46□□□□□ -1.05
NDE1-202ENST00000396355 GAS2O43903 313 aaKnown RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 NUAK1O60285 661 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RECQL5O94762 991 aaPredicted RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 SNAP29O95721 258 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 HMGCRP04035 888 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ADRB2P07550 413 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 CCNYL3P0C7X3 344 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 MATN1P21941 496 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 CYP51A1Q16850 503 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PADI6Q6TGC4 694 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 EEPD1Q7L9B9 569 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RYBPQ8N488 228 aaPredicted RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 AADATQ8N5Z0 425 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 GPRC5AQ8NFJ5 357 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 GTF2H4Q92759 462 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PTCD3Q96EY7 689 aaKnown RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 FEM1CQ96JP0 617 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ART5Q96L15 291 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RNF145Q96MT1 663 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 KREMEN1Q96MU8 473 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 DHRS9Q9BPW9 319 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 SYTL2Q9HCH5 934 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 KCTD5Q9NXV2 234 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 MPP6Q9NZW5 540 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 DFNA5O60443 496 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PLOD3O60568 738 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 KCNJ13O60928 360 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ALX3O95076 343 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 SMIM18P0DKX4 95 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RECQLP46063 649 aaPredicted RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 GLRBP48167 497 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RARRES1P49788 294 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 VBP1P61758 197 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 KCNT1Q5JUK3 1230 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 GLRA4Q5JXX5 417 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 CORO6Q6QEF8 472 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 CES3Q6UWW8 571 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 C17orf99Q6UX52 265 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 CHMP1BQ7LBR1 199 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 DHFR2Q86XF0 187 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 LGI2Q8N0V4 545 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 LNX2Q8N448 690 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ABHD11Q8NFV4 315 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 TBC1D15Q8TC07 691 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 TRPC4APQ8TEL6 797 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 VAT1Q99536 393 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 SLAMF7Q9NQ25 335 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 PLSCR3Q9NRY6 295 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 NOCTQ9UK39 431 aaKnown RBP8.46□□□□□ -1.06
NDE1-202ENST00000396355 NUP50Q9UKX7 468 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 ABCG2Q9UNQ0 655 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 RAD54BQ9Y620 910 aa8.46□□□□□ -1.06
NDE1-202ENST00000396355 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 MYO1GB0I1T2 1018 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 TP73O15350 636 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 PGLSO95336 258 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 CALCAP01258 141 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 AMHP03971 560 aa8.45□□□□□ -1.06
NDE1-202ENST00000396355 S100A6P06703 90 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms