RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MAGEH1Q9H213 219 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 PLGRKTQ9HBL7 147 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 NEUROD4Q9HD90 331 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 FAM32AQ9Y421 112 aaKnown RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 RFPL1O75677 317 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 METTL18O95568 372 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 CAPNS1P04632 268 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ERCC2P18074 760 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ADORA2BP29275 332 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ETFBP38117 255 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 NR1H2P55055 460 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 KCNC4Q03721 635 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 TGFBIQ15582 683 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 CRY1Q16526 586 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 PUS10Q3MIT2 529 aaKnown RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 C2CD6Q53TS8 623 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 HEATR6Q6AI08 1181 aaKnown RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 KIAA0930Q6ICG6 404 aaPredicted RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 METTL2BQ6P1Q9 378 aaKnown RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 TICAM1Q8IUC6 712 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 TMEM126BQ8IUX1 230 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ATP6V0D2Q8N8Y2 350 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ZNF557Q8N988 423 aaPredicted RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 USP33Q8TEY7 942 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 DHRS1Q96LJ7 313 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 SAMD11Q96NU1 681 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 MLPHQ9BV36 600 aaPredicted RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 HEMGNQ9BXL5 484 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 ZBP1Q9H171 429 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 WDCPQ9H6R7 721 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 TUBA8Q9NY65 449 aaPredicted RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 PCDHGB4Q9UN71 923 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 PCDHGB5Q9Y5G0 923 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 OR51B4Q9Y5P0 310 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
VPS41-203ENST00000395969 NOTCH4Q99466 2003 aa5.4□□□□□ -1.54
VPS41-203ENST00000395969 TCRBV7S3A2A0A539 114 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 PI4K2BG5E9Z4 385 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 CLDN5O00501 218 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 FBP2O00757 339 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 HCRTO43612 131 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 PRAMEF11O60813 436 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 B3GAT3O94766 335 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 LRIG2O94898 1065 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 MPOP05164 745 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 ITGB1P05556 798 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 APOA4P06727 396 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 MMP2P08253 660 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 TFPTP0C1Z6 253 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 PCSK2P16519 638 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 PMLP29590 882 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 ARCN1P48444 511 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 NDUFV1P49821 464 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 CDK9P50750 372 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 PDIA2Q13087 525 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 SLC12A1Q13621 1099 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 LGSNQ5TDP6 509 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 TMEM214Q6NUQ4 689 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 UNC5AQ6ZN44 842 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 KBTBD6Q86V97 674 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 IGDCC3Q8IVU1 814 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 SLC7A5P1Q8MH63 180 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 ZNF461Q8TAF7 563 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 HERVK_113Q902F9 699 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 LPPQ93052 612 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 FEM1CQ96JP0 617 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 RSPH9Q9H1X1 276 aaPredicted RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 FAM96AQ9H5X1 160 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 PRM3Q9NNZ6 103 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 MARK1Q9P0L2 795 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 VTI1BQ9UEU0 232 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 OR12D3Q9UGF7 316 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 RSL24D1Q9UHA3 163 aaKnown RBP5.4□□□□□ -1.55
VPS41-203ENST00000395969 RABL2BQ9UNT1 228 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 HS3ST4Q9Y661 456 aa5.4□□□□□ -1.55
VPS41-203ENST00000395969 ILVBLA1L0T0 632 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SLC38A8A6NNN8 435 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TARM1B6A8C7 271 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 H3BSA7 217 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 RNF103O00237 685 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ITM2AO43736 263 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ADAM23O75077 832 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 AMHP03971 560 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PRKCGP05129 697 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SERPINA6P08185 405 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CSH1P0DML2 217 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CSH2P0DML3 217 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ATP6V1B1P15313 513 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ATF6P18850 670 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 PBX3P40426 434 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 RGS7P49802 495 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GEMP55040 296 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CDH4P55283 916 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 DNAJB13P59910 316 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NFKB2Q00653 900 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KDSRQ06136 332 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SMUG1Q53HV7 270 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms