RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CFAP69A5D8W1 941 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 SIGLEC6O43699 453 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 RECQL5O94762 991 aaPredicted RBP30.87■■■□□ 2.53
CMTM4-202ENST00000394106 DKK1O94907 266 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 PGLSO95336 258 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 IPO7O95373 1038 aaKnown RBP30.87■■■□□ 2.53
CMTM4-202ENST00000394106 JUNDP17535 347 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 FECHP22830 423 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 DYNLT1P63172 113 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 INPP5AQ14642 412 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 ARMC12Q5T9G4 340 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 MFSD7Q6UXD7 560 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 NPNTQ6UXI9 565 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 SPOCK2Q92563 424 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 PHTF1Q9UMS5 762 aa30.87■■■□□ 2.53
CMTM4-202ENST00000394106 A0A0A6YYK5 440 aaPredicted RBP30.86■■■□□ 2.53
CMTM4-202ENST00000394106 C1QTNF9BB2RNN3 333 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 TOR1BO14657 336 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 PSTPIP1O43586 416 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 HLA-DQB2P05538 268 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 C1QTNF9P0C862 333 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 ZNF211Q13398 564 aaPredicted RBP30.86■■■□□ 2.53
CMTM4-202ENST00000394106 ACOX1Q15067 660 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 AGERQ15109 404 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 UNQ6494/PRO21346Q6UXR6 183 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 ZNF548Q8NEK5 533 aaPredicted RBP30.86■■■□□ 2.53
CMTM4-202ENST00000394106 OR4C6Q8NH72 309 aa30.86■■■□□ 2.53
CMTM4-202ENST00000394106 CHD8Q9HCK8 2581 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 ACACBO00763 2458 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 PTPRBP23467 1997 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 KCNK1O00180 336 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 ZFXP17010 805 aaPredicted RBP30.85■■■□□ 2.53
CMTM4-202ENST00000394106 NFKBIAP25963 317 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 VIPR1P32241 457 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 PPIDQ08752 370 aaKnown RBP30.85■■■□□ 2.53
CMTM4-202ENST00000394106 DENND2CQ68D51 928 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 DHRS13Q6UX07 377 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 RAD9BQ6WBX8 426 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 MACC1Q6ZN28 852 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 RBFAQ8N0V3 343 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 AMACRQ9UHK6 382 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 OR1A2Q9Y585 309 aa30.85■■■□□ 2.53
CMTM4-202ENST00000394106 TPRP12270 2363 aaKnown RBP30.85■■■□□ 2.53
CMTM4-202ENST00000394106 ARID1BQ8NFD5 2236 aaPredicted RBP30.85■■■□□ 2.53
CMTM4-202ENST00000394106 NEMP2A6NFY4 417 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 RFPL3O75679 317 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 JCHAINP01591 159 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 ALPPL2P10696 532 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 CYP2A6P11509 494 aaPredicted RBP30.84■■■□□ 2.53
CMTM4-202ENST00000394106 CTPS1P17812 591 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 ACADVLP49748 655 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 AP1B1Q10567 949 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 LLGL1Q15334 1064 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 PROX2Q3B8N5 592 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 ALG1LQ6GMV1 187 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 C11orf63Q6NUN7 778 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 PLA2G15Q8NCC3 412 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 LMX1AQ8TE12 382 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 APOOQ9BUR5 198 aa30.84■■■□□ 2.53
CMTM4-202ENST00000394106 FAM221BA6H8Z2 402 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 RCCD1A6NED2 376 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 SCAMP1O15126 338 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PDHA1P08559 390 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 CKMT2P17540 419 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 GM2AP17900 193 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 CES1P23141 567 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PDK1Q15118 436 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PTPRRQ15256 657 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 CNGA3Q16281 694 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 FAXCQ5TGI0 409 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 DAAM2Q86T65 1068 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PHACTR4Q8IZ21 702 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 SPC24Q8NBT2 197 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 TPCN2Q8NHX9 752 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 BTN2A2Q8WVV5 523 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 GATA6Q92908 595 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 TCEAL2Q9H3H9 227 aaPredicted RBP30.83■■■□□ 2.53
CMTM4-202ENST00000394106 NLGN3Q9NZ94 848 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 APOBEC3BQ9UH17 382 aaKnown RBP30.83■■■□□ 2.53
CMTM4-202ENST00000394106 SALL4Q9UJQ4 1053 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PNMA8BQ9ULN7 279 aaPredicted RBP30.83■■■□□ 2.53
CMTM4-202ENST00000394106 PCDHGA1Q9Y5H4 931 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 CEP295Q9C0D2 2601 aa30.83■■■□□ 2.53
CMTM4-202ENST00000394106 NPIPB15A6NHN6 443 aaPredicted RBP30.82■■■□□ 2.52
CMTM4-202ENST00000394106 AQP9O43315 295 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 GIMD1P0DJR0 217 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 KRT10P13645 584 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 HTR1BP28222 390 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 CDKN2BP42772 138 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 PEX5P50542 639 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 NAP1L1P55209 391 aaKnown RBP30.82■■■□□ 2.52
CMTM4-202ENST00000394106 DAB2P98082 770 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 NIPAL4Q0D2K0 466 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 MTM1Q13496 603 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 IHHQ14623 411 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 KAZNQ674X7 775 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 SPOCD1Q6ZMY3 1216 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 USP45Q70EL2 814 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 ACRBPQ8NEB7 543 aa30.82■■■□□ 2.52
CMTM4-202ENST00000394106 ARRDC2Q8TBH0 407 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms