RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 DSEQ9UL01 958 aa8.65□□□□□ -1.03
GABRA1-202ENST00000393943 PIN4Q9Y237 131 aaKnown RBP8.65□□□□□ -1.03
GABRA1-202ENST00000393943 VWA7Q9Y334 891 aa8.65□□□□□ -1.03
GABRA1-202ENST00000393943 RGS14O43566 566 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 USP12O75317 370 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 IFNA14P01570 189 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 LTFP02788 710 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ALDOAP04075 364 aaKnown RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CCR1P32246 355 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PRKCQQ04759 706 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 RALGDSQ12967 914 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 MARC1Q5VT66 337 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SPPL2CQ8IUH8 684 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 EFHBQ8N7U6 833 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PTGR2Q8N8N7 351 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CAB39LQ9H9S4 337 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CCM2LQ9NUG4 571 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PIH1D1Q9NWS0 290 aaKnown RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 COL20A1Q9P218 1284 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PPP2R3BQ9Y5P8 575 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 A0A087WZ62 844 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 A0A1B0GW55 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ISPDA4D126 451 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ABCB7O75027 752 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 TFAP2AP05549 437 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L2P0CJ85 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L3P0CJ86 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L4P0CJ87 422 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L5P0CJ88 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L6P0CJ89 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4L7P0CJ90 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 RAP2AP10114 183 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 GRIA2P42262 883 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PEX6Q13608 980 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 FAM187BQ17R55 369 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 GPR180Q86V85 440 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 STYXQ8WUJ0 223 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 NTAN1Q96AB6 310 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 AURKBQ96GD4 344 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ARMC1Q9NVT9 282 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DUX4Q9UBX2 424 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 COL1A2P08123 1366 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SNTNA6NMZ2 147 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CENPXA8MT69 81 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PTGES3LE9PB15 166 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 TK2O00142 265 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 FBP2O00757 339 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 LGR5O75473 907 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SCELO95171 688 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ATG7O95352 703 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CST1P01037 141 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CFHP08603 1231 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CDH1P12830 882 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 GLDCP23378 1020 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 MSX2P35548 267 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 HLCSP50747 726 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DAG1Q14118 895 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 TAB1Q15750 504 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 TAS2R42Q7RTR8 314 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 P2RY8Q86VZ1 359 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ATG16L2Q8NAA4 619 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 MCFD2Q8NI22 146 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SLC2A14Q8TDB8 520 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CAPSLQ8WWF8 208 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 HDAC10Q969S8 669 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ALG9Q9H6U8 611 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CACNA2D2Q9NY47 1150 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 ADAM30Q9UKF2 790 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 FZD10Q9ULW2 581 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 TDRKHQ9Y2W6 561 aaKnown RBP8.64□□□□□ -1.03
GABRA1-202ENST00000393943 CEPT1Q9Y6K0 416 aa8.64□□□□□ -1.03
GABRA1-202ENST00000393943 SERPINI2O75830 405 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HPRP00739 348 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 HNRNPLP14866 589 aaKnown RBP eCLIP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 IL12RB1P42701 662 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TUBA1BP68363 451 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ECT2LQ008S8 904 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 GHRHRQ02643 423 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TUBA1AQ71U36 451 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 TAGAPQ8N103 731 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 STX19Q8N4C7 294 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 FAM193BQ96PV7 902 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 AGAP2Q99490 1192 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 SH3BP1Q9Y3L3 701 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 IRS2Q9Y4H2 1338 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 PLK4O00444 970 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 NDUFS2O75306 463 aa8.63□□□□□ -1.03
GABRA1-202ENST00000393943 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
GABRA1-202ENST00000393943 ODC1P11926 461 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms