RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 SOX30O94993 753 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 VNN2O95498 520 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 MMP2P08253 660 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 HOXB5P09067 269 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 GPTP24298 496 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 PSMA4P25789 261 aaKnown RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 PIP4K2AP48426 406 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 AMTP48728 403 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 DSC1Q08554 894 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 Q0VFX4 171 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ERV3-1Q14264 604 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 DRAP1Q14919 205 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 SHBQ15464 509 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 MED22Q15528 200 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ALG11Q2TAA5 492 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 SGO1Q5FBB7 561 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 KLHL24Q6TFL4 600 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 C4orf50Q6ZRC1 276 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 C9orf47Q6ZRZ4 202 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 PXKQ7Z7A4 578 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 AADATQ8N5Z0 425 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 FRMD1Q8N878 549 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ANKRD52Q8NB46 1076 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 TMEM116Q8NCL8 245 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ADAMTS14Q8WXS8 1223 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 FAM149B1Q96BN6 582 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 NTPCRQ9BSD7 190 aaKnown RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 GPR108Q9NPR9 543 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 DDX4Q9NQI0 724 aaKnown RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ASAH2Q9NR71 780 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 FBXO9Q9UK97 447 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 PCDHA7Q9UN72 937 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 ERVK-11Q9UQG0 969 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 PSAT1Q9Y617 370 aa4.52□□□□□ -1.69
SNORA40.2-201ENST00000390847 DYTNA2CJ06 578 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 F5H0A9 414 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 J3KR12 359 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 TAF4O00268 1085 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 USO1O60763 962 aaKnown RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 SERPINI2O75830 405 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CH25HO95992 272 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 ALPLP05186 524 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 PRSS2P07478 247 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 HOXC6P09630 235 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 SNHG28P0DPA3 235 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 IL7RP16871 459 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CAPN3P20807 821 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 RXRGP48443 463 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 MXI1P50539 228 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 DCAF7P61962 342 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CRYZQ08257 329 aaKnown RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 MAMLD1Q13495 774 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 NAE1Q13564 534 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 SIM2Q14190 667 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 MAPRE1Q15691 268 aaKnown RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 TDRD12Q587J7 1177 aaKnown RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CYP20A1Q6UW02 462 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 LINGO2Q7L985 606 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 HAPLN4Q86UW8 402 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CCDC13Q8IYE1 715 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 ADSSL1Q8N142 457 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 NGEFQ8N5V2 710 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 AGBL3Q8NEM8 1001 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 PERPQ96FX8 193 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CAMK1GQ96NX5 476 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 SCPEP1Q9HB40 452 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 FBRSL1Q9HCM7 1045 aaKnown RBP4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 EHD2Q9NZN4 543 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 DLGAP2Q9P1A6 1054 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 RCOR1Q9UKL0 485 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
SNORA40.2-201ENST00000390847 LINC01553A4QN01 128 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 PI4KAP2A4QPH2 592 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 TMEM202A6NGA9 273 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 AKR1B15C9JRZ8 316 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 ZIC3O60481 467 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 PAGE4O60829 102 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 KCNJ13O60928 360 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 NKX2-2O95096 273 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 NTN1O95631 604 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 PPARGP37231 505 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 HTR6P50406 440 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 F2RL1P55085 397 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 ARF3P61204 181 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 ARF1P84077 181 aaKnown RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 CEBPZQ03701 1054 aaKnown RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 PLCB4Q15147 1175 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 GPATCH4Q5T3I0 446 aaKnown RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 SNX30Q5VWJ9 437 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 HIST2H2BCQ6DN03 193 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 HIST2H2BDQ6DRA6 164 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 TTI2Q6NXR4 508 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 QSOX2Q6ZRP7 698 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 CCDC129Q6ZRS4 1044 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 NEK10Q6ZWH5 1172 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 ZC3HC1Q86WB0 502 aaKnown RBP4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 DSELQ8IZU8 1212 aa4.5□□□□□ -1.69
SNORA40.2-201ENST00000390847 NEK9Q8TD19 979 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms