RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PLA2R1Q13018 1463 aa-2.21□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DOPEY2Q9Y3R5 2298 aa-2.21□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SMCHD1A6NHR9 2005 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DOCK9Q9BZ29 2069 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 IGKV1-27A0A075B6S5 117 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 A6NL46 340 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MPTX1A8MV57 137 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GFYI3L273 518 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MYO1CO00159 1063 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PLD2O14939 933 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TO15178 435 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TRIAP1O43715 76 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TLR5O60602 858 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TMEM127O75204 238 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 EML2O95834 649 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FESP07332 822 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MRPL3P09001 348 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 IGHV4-30-4P0DP06 118 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GP1BBP13224 206 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ATP1A3P13637 1013 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TCF3P15923 654 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF182P17025 639 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CDK11BP21127 795 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HSD3B2P26439 372 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 C21orf33P30042 268 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 AARSP49588 968 aaKnown RBP eCLIP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MEOX2P50222 304 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SUCLG1P53597 346 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RAP2BP61225 183 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HERVK_113P61574 105 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MEF2AQ02078 507 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CD69Q07108 199 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 KCNAB2Q13303 367 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SEPT7Q16181 437 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PREPLQ4J6C6 727 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TECRLQ5HYJ1 363 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RRP12Q5JTH9 1297 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CTRB2Q6GPI1 263 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 VSTM1Q6UX27 236 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZBTB49Q6ZSB9 765 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ASB18Q6ZVZ8 466 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TFAP2DQ7Z6R9 452 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 VSIG1Q86XK7 387 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HERC6Q8IVU3 1022 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAM186BQ8IYM0 893 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RBBP8NLQ8NC74 664 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OR6J1Q8NGC5 347 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF461Q8TAF7 563 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SLC22A17Q8WUG5 538 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAM136AQ96C01 138 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ATG4CQ96DT6 458 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 KAZALD1Q96I82 304 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CHAMP1Q96JM3 812 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 APOLD1Q96LR9 279 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RNPC3Q96LT9 517 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TM2D3Q9BRN9 247 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF416Q9BWM5 594 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OSBPL7Q9BZF2 842 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LRRCC1Q9C099 1032 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 B3GNT4Q9C0J1 378 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SIK2Q9H0K1 926 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GLT8D2Q9H1C3 349 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 COG4Q9H9E3 785 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ARNT2Q9HBZ2 717 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CNNM1Q9NRU3 951 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CA10Q9NS85 328 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ADPRHL2Q9NX46 363 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PPP4R2Q9NY27 417 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RNF14Q9UBS8 474 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GGA2Q9UJY4 613 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAF1Q9UNN5 650 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NDUFB9Q9Y6M9 179 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DNAH7Q8WXX0 4024 aa-2.22□□□□□ -2.76
RNU6-1340P-201ENST00000384438 IGKV1D-13A0A0B4J2D9 117 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 A0A0G2JPF8 293 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KANSL1LA0AUZ9 987 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 VWA3AA6NCI4 1184 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 RASSF10A6NK89 507 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HNRNPCL3B7ZW38 293 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 F5H697 171 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 K7ENM7 598 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TNFSF11O14788 317 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 DCLK1O15075 740 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LDB2O43679 373 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HNRNPCL1O60812 293 aaKnown RBP-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PRDM1O75626 825 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LY86O95711 162 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CAVIN2O95810 425 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 IGLV6-57P01721 117 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 RAF1P04049 648 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HNRNPCL4P0DMR1 293 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 IGKV1-13P0DP09 117 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CDH1P12830 882 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HLA-DOBP13765 273 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TFEBP19484 476 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CDH3P22223 829 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ACADLP28330 430 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GUCY1A2P33402 732 aa-2.23□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GJC1P36383 396 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms