RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 PCDHGA2Q9Y5H1 932 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 BPTFQ12830 3046 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 SF3B1O75533 1304 aaKnown RBP eCLIP6.08□□□□□ -1.44
MSR1-204ENST00000381998 WDR27A2RRH5 827 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 ZNF195O14628 629 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 SUSD5O60279 629 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 HBP1O60381 514 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 PLIN3O60664 434 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 OPHN1O60890 802 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TSC22D2O75157 780 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 OR6B1O95007 311 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 C22orf31O95567 290 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 PFKMP08237 780 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 VCLP18206 1134 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TGM2P21980 687 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 ALAS2P22557 587 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 CENPAP49450 140 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 ALDH3A2P51648 485 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 CLCQ05315 142 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 MED21Q13503 144 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 LAPTM5Q13571 262 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 PLCL1Q15111 1095 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 SLC5A9Q2M3M2 681 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 SHQ1Q6PI26 577 aaKnown RBP6.08□□□□□ -1.44
MSR1-204ENST00000381998 ISLR2Q6UXK2 745 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TIFABQ6ZNK6 161 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 SATL1Q86VE3 508 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 LRRC49Q8IUZ0 686 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 MAP7D3Q8IWC1 876 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 DEFB107AQ8IZN7 70 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TMEM102Q8N9M5 508 aaPredicted RBP6.08□□□□□ -1.44
MSR1-204ENST00000381998 ACTRT2Q8TDY3 377 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TFB1MQ8WVM0 346 aaKnown RBP6.08□□□□□ -1.44
MSR1-204ENST00000381998 PGLYRP2Q96PD5 576 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 HAPLN3Q96S86 360 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 OXCT2Q9BYC2 517 aaPredicted RBP6.08□□□□□ -1.44
MSR1-204ENST00000381998 SORCS3Q9UPU3 1222 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 TNFSF13BQ9Y275 285 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 MFHAS1Q9Y4C4 1052 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 PCDHA11Q9Y5I1 949 aa6.08□□□□□ -1.44
MSR1-204ENST00000381998 KRBA1A5PL33 1030 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 H3BNX3 289 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 DCXO43602 365 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 STAMBPO95630 424 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 F7P08709 466 aaPredicted RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 UQCRBP14927 111 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 RAG1P15918 1043 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 ITGAXP20702 1163 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CYP2F1P24903 491 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 MC4RP32245 332 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 SERPINB6P35237 376 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PIK3CBP42338 1070 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 SLC26A2P50443 739 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 HDAC4P56524 1084 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PPIL2Q13356 520 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PDK2Q15119 407 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 TRIP10Q15642 601 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 DBN1Q16643 649 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 MAJINQ3KP22 176 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 JADE1Q6IE81 842 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PMF1Q6P1K2 205 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CASC4Q6P4E1 433 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 OLFML1Q6UWY5 402 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PLEKHM3Q6ZWE6 761 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 LRRTM4Q86VH4 590 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 ST13P4Q8IZP2 240 aaPredicted RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 NETO2Q8NC67 525 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CDCA5Q96FF9 252 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 YME1L1Q96TA2 773 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NDNQ99608 321 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CENPKQ9BS16 269 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CCDC28BQ9BUN5 200 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 KLHL4Q9C0H6 718 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NACA2Q9H009 215 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NRDE2Q9H7Z3 1164 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 RPF1Q9H9Y2 349 aaKnown RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 XPNPEP3Q9NQH7 507 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 TSPAN16Q9UKR8 245 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PACSIN3Q9UKS6 424 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 ITGA11Q9UKX5 1188 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PCDHGB4Q9UN71 923 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 CAPN8A6NHC0 703 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 LRRC14BA6NHZ5 514 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 GCATO75600 419 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 KLHL2O95198 593 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 IL18RAPO95256 599 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PGM3O95394 542 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 SERPINE1P05121 402 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 PABPC4LP0CB38 370 aaKnown RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 INSRRP14616 1297 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NCF2P19878 526 aaPredicted RBP6.07□□□□□ -1.44
MSR1-204ENST00000381998 GSK3AP49840 483 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 SERPINB9P50453 376 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 TKTL1P51854 596 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NDST1P52848 882 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 ARHGAP1Q07960 439 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 NIPAL4Q0D2K0 466 aa6.07□□□□□ -1.44
MSR1-204ENST00000381998 SGCGQ13326 291 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms