RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 FAM131BQ86XD5 332 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 LIX1Q8N485 282 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 UBR7Q8N806 425 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 HTR3CQ8WXA8 447 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 C12orf66Q96MD2 445 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 SNTG2Q9NY99 539 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 CCDC167Q9P0B6 97 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 ERCC2P18074 760 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 PFKPQ01813 784 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 DENND6BQ8NEG7 585 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 H0Y858 1186 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 SDC2P34741 201 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 AQP5P55064 265 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 HSPA14Q0VDF9 509 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 EPC2Q52LR7 807 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 GCNT7Q6ZNI0 430 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 DNAAF1Q8NEP3 725 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 PHPT1Q9NRX4 125 aaPredicted RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 KLQ9UEF7 1012 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 GRIN2DO15399 1336 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 BACE1P56817 501 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 NUDT5Q9UKK9 219 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ENTPD5O75356 428 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 MATN4O95460 622 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 TTKP33981 857 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 SEMA4DQ92854 862 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 TRDMT1O14717 391 aaKnown RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 PRH1P02810 166 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ELP6Q0PNE2 266 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 SPATA31A6Q5VVP1 1343 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 UGT2B17O75795 530 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 NR4A1P22736 598 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 IZUMO2Q6UXV1 221 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 CORO1BQ9BR76 489 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 BTBD10Q9BSF8 475 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 GSC2O15499 205 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 AVPR1BP47901 424 aa11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
PTCHD1-201ENST00000379361 CDC25CP30307 473 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PTPRNQ16849 979 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OVCA2Q8WZ82 227 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OTUB2Q96DC9 234 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 NTRK1P04629 796 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PSEN2P49810 448 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 XKR6Q5GH73 641 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FMR1NBQ8N0W7 255 aaPredicted RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 EDEM1Q92611 657 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FCRL4Q96PJ5 515 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TBC1D10AQ9BXI6 508 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 RHPN2P1A8MT19 583 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TNFRSF21O75509 655 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 HDCP19113 662 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 STK32CQ86UX6 486 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OGDHLQ9ULD0 1010 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PCDHA3Q9Y5H8 950 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 DOCK6Q96HP0 2047 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 H0YGN5 161 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PTPN4P29074 926 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 SBK1Q52WX2 424 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 SNX32Q86XE0 403 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 KERAO60938 352 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 BDNFP23560 247 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ADORA2AP29274 412 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 CDKL1Q00532 357 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TMPRSS6Q8IU80 811 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FNIP1Q8TF40 1166 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 CEP170Q5SW79 1584 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 IL1R1P14778 569 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 CASP9P55211 416 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms