RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CDYLQ9Y232 598 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 ATP11BQ9Y2G3 1177 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 GRID2O43424 1007 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 CLDN11O75508 207 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 PARNO95453 639 aaKnown RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 EFEMP2O95967 443 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 COX4I1P13073 169 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 CORO1AP31146 461 aaKnown RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 CLNS1AP54105 237 aaKnown RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 CUL3Q13618 768 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 IKBKEQ14164 716 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 PTPRCAPQ14761 206 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 PDCD2Q16342 344 aaPredicted RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 LSM12Q3MHD2 195 aaKnown RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 RALGPS1Q5JS13 557 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 ALG1LQ6GMV1 187 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 KLHDC10Q6PID8 442 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 FRMD7Q6ZUT3 714 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 SPNS2Q8IVW8 549 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 BRSK1Q8TDC3 778 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 PEX13Q92968 403 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 VWCEQ96DN2 955 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 CCDC126Q96EE4 140 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 IGSF21Q96ID5 467 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 PRICKLE1Q96MT3 831 aaPredicted RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 PANX3Q96QZ0 392 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 OSBPL1AQ9BXW6 950 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 CYP4F11Q9HBI6 524 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 CYP4F12Q9HCS2 524 aa20.3■□□□□ 0.84
VSX1-202ENST00000376709 AFF4Q9UHB7 1163 aaKnown RBP20.3■□□□□ 0.84
VSX1-202ENST00000376709 A0A088AWK7 358 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SEC24AO95486 1093 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 GOT2P00505 430 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 RBP1P09455 135 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 PRDX6P30041 224 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SERPINB5P36952 375 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 CDKN2DP55273 166 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 DNAJB13P59910 316 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ACVR1Q04771 509 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SLC14A2Q15849 920 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 MRNIPQ6NTE8 343 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 PSKH2Q96QS6 385 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 GKN1Q9NS71 199 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SSX2IPQ9Y2D8 614 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 H3BNC9 293 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 CD3EAPO15446 510 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 TBX10O75333 385 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 RPP40O75818 363 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 STC2O76061 302 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SNUPNO95149 360 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 NDST3O95803 873 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 KLKB1P03952 638 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 RHOCP08134 193 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 IRF1P10914 325 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 SCNN1BP51168 640 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SLC34A1Q06495 639 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ZNF177Q13360 481 aaPredicted RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 PEX6Q13608 980 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ACAP2Q15057 778 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SH2D4BQ5SQS7 431 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 NXNQ6DKJ4 435 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 KIRREL3Q8IZU9 778 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 OR13C4Q8NGS5 318 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ZNF461Q8TAF7 563 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ANKRD49Q8WVL7 239 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 CNDP1Q96KN2 507 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 EXOC2Q96KP1 924 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 UBXN10Q96LJ8 280 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 TOX2Q96NM4 488 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 CLSTN3Q9BQT9 956 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 GTSE1Q9NYZ3 720 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 STX18Q9P2W9 335 aaKnown RBP20.29■□□□□ 0.84
VSX1-202ENST00000376709 TBX21Q9UL17 535 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 ARHGAP26Q9UNA1 814 aa20.29■□□□□ 0.84
VSX1-202ENST00000376709 KDELR3O43731 214 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 ZMPSTE24O75844 475 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 IPO13O94829 963 aaKnown RBP20.28■□□□□ 0.84
VSX1-202ENST00000376709 SLC4A1P02730 911 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 ALDH1A3P47895 512 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 ERFP50548 548 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 ACTR3P61158 418 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 PFKPQ01813 784 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 FAM45BPQ6NSW5 357 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 FAM117BQ6P1L5 589 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 CNKSR3Q6P9H4 555 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 FAM45AQ8TCE6 357 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 BEGAINQ9BUH8 593 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 PCDH10Q9P2E7 1040 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 G3BP2Q9UN86 482 aaKnown RBP20.28■□□□□ 0.84
VSX1-202ENST00000376709 COL4A6Q14031 1691 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 CCDC162PA2VCL2 907 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 A8MT66 165 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 JUNP05412 331 aaKnown RBP20.28■□□□□ 0.84
VSX1-202ENST00000376709 HNRNPLP14866 589 aaKnown RBP eCLIP20.28■□□□□ 0.84
VSX1-202ENST00000376709 SGSHP51688 502 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 PLK1P53350 603 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 PLD1Q13393 1074 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms