RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NEK3P51956 506 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FASTKQ14296 549 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FGL2Q14314 439 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SLC36A4Q6YBV0 504 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SPOCD1Q6ZMY3 1216 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 RIPOR1Q6ZS17 1223 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 VN1R5Q7Z5H4 357 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 LZTR1Q8N653 840 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 VAT1Q99536 393 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 IRX2Q9BZI1 471 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 C3orf18Q9UK00 162 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ERVW-1Q9UQF0 538 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 HACD1B0YJ81 288 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 RGS14O43566 566 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PSMG1O95456 288 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SLC2A4P14672 509 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TNK2Q07912 1038 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 DDX39BQ13838 428 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SMCO1Q147U7 214 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CYP4X1Q8N118 509 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 BLOC1S5Q8TDH9 187 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM175Q9BSA9 504 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TBC1D17Q9HA65 648 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 GPRC5CQ9NQ84 441 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PDLIM7Q9NR12 457 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 POLR1DQ9Y2S0 133 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TRDMT1O14717 391 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FFAR2O15552 330 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SEMA3DO95025 777 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 BRCC3P46736 316 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 STARP49675 285 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RHAGQ02094 409 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC20A2Q08357 652 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 OLFML1Q6UWY5 402 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ABRAXAS1Q6UWZ7 409 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CXXC5Q7LFL8 322 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 REXO1L1PQ8IX06 675 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 UXS1Q8NBZ7 420 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 OR52L1Q8NGH7 329 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FIG4Q92562 907 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 MARCH2Q9P0N8 246 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ITGA11Q9UKX5 1188 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 KIAA0100Q14667 2235 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 C9J4A7 227 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SEC24AO95486 1093 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CER1O95813 267 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CCNYL3P0C7X3 344 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC1A6P48664 564 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 DGKGP49619 791 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PTENP60484 403 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CYP4F8P98187 520 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PTSQ03393 145 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 STK4Q13043 487 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 HSDL1Q3SXM5 330 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 STK32CQ86UX6 486 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FAM126BQ8IXS8 530 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 GKN1Q9NS71 199 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PNPLA3Q9NST1 481 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RIPK3Q9Y572 518 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 BTN3A3O00478 584 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC31A1O15431 190 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SSNA1O43805 119 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 BGNP21810 368 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SREBF1P36956 1147 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 OLR1P78380 273 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PTGES3Q15185 160 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 NEDD8Q15843 81 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PAGE2BQ5JRK9 111 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLFN11Q7Z7L1 901 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC38A2Q96QD8 506 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PANX3Q96QZ0 392 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TPSD1Q9BZJ3 242 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 MTMR12Q9C0I1 747 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 NEUROD4Q9HD90 331 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CLN6Q9NWW5 311 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PNMA8BQ9ULN7 279 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ERI2A8K979 691 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CYBAP13498 195 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF7P17097 686 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 LBPP18428 481 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 WDR5P61964 334 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ITGB3BPQ13352 177 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 AAGABQ6PD74 315 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 NANOGNBQ7Z5D8 188 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ECHDC2Q86YB7 292 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms