RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TNFAIP8L3Q5GJ75 292 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 MTSS1LQ765P7 747 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 ECHDC2Q86YB7 292 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 FAM13CQ8NE31 585 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 SKA1Q96BD8 255 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 GAD1Q99259 594 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 S100A14Q9HCY8 104 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 SSU72Q9NP77 194 aaKnown RBP14.27□□□□□ -0.13
LMX1B-202ENST00000373474 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 SAGE2PA6NJ88 616 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 DCDC2CA8MYV0 355 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 DBTP11182 482 aaKnown RBP14.27□□□□□ -0.13
LMX1B-202ENST00000373474 PTPN3P26045 913 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 EPHA3P29320 983 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 RFX4Q33E94 735 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 ADGRD1Q6QNK2 874 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 PPP3R2Q96LZ3 170 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 MRPL45Q9BRJ2 306 aaKnown RBP14.27□□□□□ -0.13
LMX1B-202ENST00000373474 XPR1Q9UBH6 696 aa14.27□□□□□ -0.13
LMX1B-202ENST00000373474 PAPSS1O43252 624 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 RAP1GAP2Q684P5 730 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 CLNKQ7Z7G1 428 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 AP4B1Q9Y6B7 739 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 B4GALT5O43286 388 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 SERPINA1P01009 418 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 TTPAP49638 278 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 LPIN1Q14693 890 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 SLC1A5Q15758 541 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 INSCQ1MX18 579 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 GPC2Q8N158 579 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 ZNF614Q8N883 585 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 BPIFB6Q8NFQ5 453 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 C7orf26Q96N11 449 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 S100A13Q99584 98 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 RPS6KA6Q9UK32 745 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 FZD1Q9UP38 647 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 YDJCA8MPS7 323 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 FOSL2P15408 326 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 SCNN1GP51170 649 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 ARHGDIBP52566 201 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 USP45Q70EL2 814 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 C12orf29Q8N999 325 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 SOCS4Q8WXH5 440 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 GMPPBQ9Y5P6 360 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 RICTORQ6R327 1708 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 CCNKO75909 580 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 ANXA5P08758 320 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 RAB15P59190 212 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 DNAJB14Q8TBM8 379 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 DUSP16Q9BY84 665 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 PDGFDQ9GZP0 370 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 TMEM165Q9HC07 324 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 GPN1Q9HCN4 374 aaPredicted RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 ERGIC3Q9Y282 383 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 BTRCQ9Y297 605 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 KHDRBS3O75525 346 aaKnown RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 MTA2O94776 668 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 GTF2E2P29084 291 aaKnown RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
LMX1B-202ENST00000373474 GPR107Q5VW38 600 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 LYPLAL1Q5VWZ2 237 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 LRRC52Q8N7C0 313 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 NEK6Q9HC98 313 aa14.26□□□□□ -0.13
LMX1B-202ENST00000373474 BBIP1A8MTZ0 92 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 CAPGP40121 348 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
LMX1B-202ENST00000373474 SCRN3Q0VDG4 424 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 CBX3Q13185 183 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 TUBA3CQ13748 450 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 ACOX1Q15067 660 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 INTS11Q5TA45 600 aaKnown RBP14.25□□□□□ -0.13
LMX1B-202ENST00000373474 HIPK1Q86Z02 1210 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 SPG21Q9NZD8 308 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 CIDEBQ9UHD4 219 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 CABYRO75952 493 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 USP46P62068 366 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 TRIM32Q13049 653 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 SLC25A52Q3SY17 297 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 PTPN20Q4JDL3 420 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 ABHD15Q6UXT9 468 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 SENP6Q9GZR1 1112 aaPredicted RBP14.25□□□□□ -0.13
LMX1B-202ENST00000373474 DHX33Q9H6R0 707 aaKnown RBP14.25□□□□□ -0.13
LMX1B-202ENST00000373474 GALNT8Q9NY28 637 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 PTCH2Q9Y6C5 1203 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 PRLP01236 227 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 IDO1P14902 403 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 ERCC2P18074 760 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 MYL9P24844 172 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 ACADLP28330 430 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 CDKN2BP42772 138 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 RPS6KA3P51812 740 aa14.25□□□□□ -0.13
LMX1B-202ENST00000373474 GPRIN3Q6ZVF9 776 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms