RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TMEM192Q8IY95 271 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 CYP4Z2PQ8N1L4 340 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 SPATA6LQ8N4H0 392 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 CCDC185Q8N715 623 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 LRRN4CLQ8ND94 238 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 SCAMP5Q8TAC9 235 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ACTRT2Q8TDY3 377 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 NACC2Q96BF6 587 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 MCCC1Q96RQ3 725 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 RERGLQ9H628 205 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 POLMQ9NP87 494 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 XPR1Q9UBH6 696 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 POLR1DQ9Y2S0 133 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 PCDHGC4Q9Y5F7 938 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 H3BM21 787 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 H3BQF6 201 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 F2P00734 622 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 KRT8P05787 483 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 GRIA4P48058 902 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 DSC2Q02487 901 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 SLC20A2Q08357 652 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 GSTA3Q16772 222 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 DUPD1Q68J44 220 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 TXNDC11Q6PKC3 985 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ZNF296Q8WUU4 475 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 NMUR1Q9HB89 426 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ATG13O75143 517 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ERAL1O75616 437 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 TSPAN8P19075 237 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 SPAM1P38567 509 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 AP1S1P61966 158 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ENPEPQ07075 957 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 TAF5Q15542 800 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 UBE2R2Q712K3 238 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 DPP10Q8N608 796 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 TSEN2Q8NCE0 465 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 CLP1Q92989 425 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 RPL10LQ96L21 214 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 WRAP53Q9BUR4 548 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 ARMCX1Q9P291 453 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 CACNG4Q9UBN1 327 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 GABRQQ9UN88 632 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 DHX15O43143 795 aaKnown RBP14.77□□□□□ -0.04
NDC1-201ENST00000371429 NOL4O94818 638 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 OR6A2O95222 327 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 ILF3Q12906 894 aaKnown RBP eCLIP14.77□□□□□ -0.04
NDC1-201ENST00000371429 SH3RF2Q8TEC5 729 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 ZNF232Q9UNY5 417 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 YIPF1Q9Y548 306 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 TCRBV9S1A1TA0A576 114 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 MAN1A2O60476 641 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 UBTFL6P0CB48 400 aaPredicted RBP14.77□□□□□ -0.04
NDC1-201ENST00000371429 COL6A1P12109 1028 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 CRATP43155 626 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 PLA2G4EQ3MJ16 856 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 APTXQ7Z2E3 356 aaKnown RBP14.77□□□□□ -0.04
NDC1-201ENST00000371429 C17orf64Q86WR6 236 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 DAW1Q8N136 415 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 GLMNQ92990 594 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 MINDY3Q9H8M7 445 aa14.77□□□□□ -0.04
NDC1-201ENST00000371429 FCF1Q9Y324 198 aaKnown RBP14.77□□□□□ -0.04
NDC1-201ENST00000371429 TRBV23OR9-2A0A075B6M9 112 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RNF225M0QZC1 329 aaPredicted RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 ALOX15BO15296 676 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 PKMP14618 531 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 SCTRP47872 440 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 CCDC142Q17RM4 750 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 ICE2Q659A1 982 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 PYROXD2Q8N2H3 581 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RTL3Q8N8U3 475 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 BCAS3Q9H6U6 928 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 SNX15Q9NRS6 342 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 MRPS33Q9Y291 106 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 CCDC189A1A4V9 331 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 FSBPO95073 299 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 ATP6V1B1P15313 513 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 EPORP19235 508 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RPL3P39023 403 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 TRMT5Q32P41 509 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 CAPRIN2Q6IMN6 1127 aaKnown RBP14.77□□□□□ -0.05
NDC1-201ENST00000371429 BHLHB9Q6PI77 547 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 CERS6Q6ZMG9 384 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 GALNT13Q8IUC8 556 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 DSELQ8IZU8 1212 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 SUSD3Q96L08 255 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RNF145Q96MT1 663 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 BDH2Q9BUT1 245 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RHOJQ9H4E5 214 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 FANCEQ9HB96 536 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 RNF186Q9NXI6 227 aa14.77□□□□□ -0.05
NDC1-201ENST00000371429 PBX1P40424 430 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 GJA9P57773 515 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 DSG1Q02413 1049 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 SAMD4BQ5PRF9 694 aaKnown RBP14.76□□□□□ -0.05
NDC1-201ENST00000371429 INTS11Q5TA45 600 aaKnown RBP14.76□□□□□ -0.05
NDC1-201ENST00000371429 SCIMPQ6UWF3 145 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 PACS1Q6VY07 963 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 TMEM26Q6ZUK4 368 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 POMGNT2Q8NAT1 580 aa14.76□□□□□ -0.05
NDC1-201ENST00000371429 HMCESQ96FZ2 354 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms