RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 KRT1P04264 644 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 MX2P20592 715 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 CYLC1P35663 651 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 HNRNPKP61978 463 aaKnown RBP eCLIP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 TAZQ16635 292 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 UNQ6494/PRO21346Q6UXR6 183 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 PLA2G15Q8NCC3 412 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 ARRDC2Q8TBH0 407 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 PIH1D2Q8WWB5 315 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 RNF25Q96BH1 459 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 POLR1EQ9GZS1 481 aaKnown RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 RBM22Q9NW64 420 aaKnown RBP eCLIP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 DDX56Q9NY93 547 aaKnown RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 AMACRQ9UHK6 382 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 PHTF1Q9UMS5 762 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 REXO2Q9Y3B8 237 aaKnown RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 PPIL1Q9Y3C6 166 aa19.03■□□□□ 0.64
CKS1B-203ENST00000368439 EPN1Q9Y6I3 576 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-203ENST00000368439 A8MX80 341 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 SCAMP1O15126 338 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 LZTS3O60299 673 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 RECQL5O94762 991 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 NDUFA10O95299 355 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 HLA-DQB2P05538 268 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PDHA1P08559 390 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 ELFN1P0C7U0 828 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 CCNB1P14635 433 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PEX5P50542 639 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 THOP1P52888 689 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 DSC2Q02487 901 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PPIDQ08752 370 aaKnown RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 NIPAL4Q0D2K0 466 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PTK2BQ14289 1009 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PTPRRQ15256 657 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 SMAD1Q15797 465 aaKnown RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 MFSD7Q6UXD7 560 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 RAD9BQ6WBX8 426 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 CCNI2Q6ZMN8 369 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 MACC1Q6ZN28 852 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 TMTC1Q8IUR5 882 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 CCDC13Q8IYE1 715 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 ZNF548Q8NEK5 533 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 PDCD6IPQ8WUM4 868 aaKnown RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 COQ10AQ96MF6 247 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 OLFM3Q96PB7 478 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 MCCC1Q96RQ3 725 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 LGMNQ99538 433 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 TCEAL2Q9H3H9 227 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-203ENST00000368439 RAI2Q9Y5P3 530 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 IGF2RP11717 2491 aa19.02■□□□□ 0.64
CKS1B-203ENST00000368439 FFAR2O15552 330 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 SPOPO43791 374 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 NEBLO76041 1014 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 PROS1P07225 676 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 JUNDP17535 347 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 CKMT2P17540 419 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 LHCGRP22888 699 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 ACP1P24666 158 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 VIPR1P32241 457 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 CDKN2BP42772 138 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 NOP2P46087 812 aaKnown RBP19.01■□□□□ 0.63
CKS1B-203ENST00000368439 INPP5AQ14642 412 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 SPA17Q15506 151 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 CNGA3Q16281 694 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 DHRS13Q6UX07 377 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 NPNTQ6UXI9 565 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 NYAP1Q6ZVC0 841 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 TMEM139Q8IV31 216 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 RBFAQ8N0V3 343 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 PELI3Q8N2H9 469 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 CNTD1Q8N815 330 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 SCRN2Q96FV2 425 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 IL12RB2Q99665 862 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 APOOQ9BUR5 198 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 NLGN3Q9NZ94 848 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 CSNK1G3Q9Y6M4 447 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 MYLKQ15746 1914 aa19.01■□□□□ 0.63
CKS1B-203ENST00000368439 LY6G6EA0A0G2JKS1 128 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 NPIPB15A6NHN6 443 aaPredicted RBP19■□□□□ 0.63
CKS1B-203ENST00000368439 H3BM21 787 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 K7ESM1 405 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 APOL1O14791 398 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 PSTPIP1O43586 416 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 RFPL3O75679 317 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 HEXIM1O94992 359 aaKnown RBP19■□□□□ 0.63
CKS1B-203ENST00000368439 PRLP01236 227 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 CAPNS1P04632 268 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 PCCBP05166 539 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 MMP2P08253 660 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 C1SP09871 688 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 TNNT1P13805 278 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 CES1P23141 567 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 IFI35P80217 286 aaPredicted RBP19■□□□□ 0.63
CKS1B-203ENST00000368439 ITKQ08881 620 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 ZBTB17Q13105 803 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 MTM1Q13496 603 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 NFATC4Q14934 902 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 FAM182AQ5T1J6 154 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 ARMC12Q5T9G4 340 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 C11orf63Q6NUN7 778 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms