RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 KIAA0319Q5VV43 1072 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 PDZD4Q76G19 769 aaPredicted RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 PIM3Q86V86 326 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 NPLQ9BXD5 320 aaPredicted RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 DUSP16Q9BY84 665 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 RPF2Q9H7B2 306 aaKnown RBP13.65□□□□□ -0.22
PRKN-205ENST00000366897 PFDN4Q9NQP4 134 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 USP22Q9UPT9 525 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 SH3GLB1Q9Y371 365 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
PRKN-205ENST00000366897 DHRS12A0PJE2 317 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 NPHS1O60500 1241 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 CNMDO75829 334 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 ZNF182P17025 639 aaPredicted RBP13.64□□□□□ -0.23
PRKN-205ENST00000366897 BDNFP23560 247 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 ARCN1P48444 511 aaKnown RBP13.64□□□□□ -0.23
PRKN-205ENST00000366897 CD151P48509 253 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 SLC26A2P50443 739 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 MERTKQ12866 999 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 TTLL4Q14679 1199 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 RAB39AQ14964 217 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 ALDH16A1Q8IZ83 802 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 LINC01465Q8N7H1 131 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 HM13Q8TCT9 377 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 TBL1YQ9BQ87 522 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 CLOCKO15516 846 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 IPO13O94829 963 aaKnown RBP13.64□□□□□ -0.23
PRKN-205ENST00000366897 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
PRKN-205ENST00000366897 ZBTB11O95625 1053 aaPredicted RBP13.64□□□□□ -0.23
PRKN-205ENST00000366897 NR4A1P22736 598 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 RNF34Q969K3 372 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 KCNA7Q96RP8 456 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 SLC25A23Q9BV35 468 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 BRD8Q9H0E9 1235 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 MEAF6Q9HAF1 191 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 MAP10Q9P2G4 905 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
PRKN-205ENST00000366897 A0A0J9YYE9 177 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 INPP4BO15327 924 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 HUS1O60921 280 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 SLC4A1P02730 911 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 CAPN3P20807 821 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 UGT1A1P22309 533 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 UGT1A4P22310 534 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 UGT1A3P35503 534 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 UGT1A5P35504 534 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 HK2P52789 917 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 PRKAA2P54646 552 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 FOXA1P55317 472 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 TUBA4AP68366 448 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 GALNT2Q10471 571 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 GRB7Q14451 532 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 ZIK1Q3SY52 487 aaPredicted RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 FUT11Q495W5 492 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 TECRLQ5HYJ1 363 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 DENND5AQ6IQ26 1287 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 ANKFN1Q8N957 763 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 MAGEE2Q8TD90 523 aaPredicted RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 UHRF1Q96T88 793 aaPredicted RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 SELENONQ9NZV5 590 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 TTC24A2A3L6 582 aaPredicted RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 KCNH1O95259 989 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 BMP2P12643 396 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 SCNN1AP37088 669 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 HADHAP40939 763 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 CASP2P42575 452 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 PSMD8P48556 350 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 CD300CQ08708 224 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 TRAP1Q12931 704 aaKnown RBP13.63□□□□□ -0.23
PRKN-205ENST00000366897 MAPRE2Q15555 327 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 TANKQ92844 425 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 BEGAINQ9BUH8 593 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 AKTIPQ9H8T0 292 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 INIPQ9NRY2 104 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 BTRCQ9Y297 605 aa13.63□□□□□ -0.23
PRKN-205ENST00000366897 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 OR51F1A6NGY5 319 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 H0YJX3 145 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 H3BRB1 525 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SNAP29O95721 258 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 POLR2IP36954 125 aaKnown RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 ADCYAP1R1P41586 468 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 GNA12Q03113 381 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms