RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 PTK2BQ14289 1009 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ST3GAL2Q16842 350 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ARMC12Q5T9G4 340 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 KAZNQ674X7 775 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 MFSD7Q6UXD7 560 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 NYAP1Q6ZVC0 841 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 DPPA4Q7L190 304 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 RD3Q7Z3Z2 195 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PLD5Q8N7P1 536 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 MAML1Q92585 1016 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 TSGA13Q96PP4 275 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 POLR1EQ9GZS1 481 aaKnown RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 DDX56Q9NY93 547 aaKnown RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PNMA8BQ9ULN7 279 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 RCCD1A6NED2 376 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 H3BM21 787 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 NDUFA10O95299 355 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PGLSO95336 258 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 LCA5LO95447 670 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PDHA1P08559 390 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ALPIP09923 528 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 KRT10P13645 584 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 NME1P15531 152 aaKnown RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 CKMT2P17540 419 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 NAP1L1P55209 391 aaKnown RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 YPEL5P62699 121 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 DAB2P98082 770 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 AP1B1Q10567 949 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ZNF211Q13398 564 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 TCEAL1Q15170 157 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 DEFB133Q30KQ1 61 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ENPP7Q6UWV6 458 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 RAD9BQ6WBX8 426 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 CCDC13Q8IYE1 715 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 TSACCQ96A04 125 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 APOOQ9BUR5 198 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 CEP41Q9BYV8 373 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-205ENST00000366731 SALL4Q9UJQ4 1053 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 DUSP10Q9Y6W6 482 aa13.73□□□□□ -0.21
MRPL55-205ENST00000366731 NEMP2A6NFY4 417 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 K7ESM1 405 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 AQP9O43315 295 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
MRPL55-205ENST00000366731 GIMD1P0DJR0 217 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 VIPR1P32241 457 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 ACADVLP49748 655 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 EPHB1P54762 984 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 PPARDQ03181 441 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 NIPAL4Q0D2K0 466 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 IHHQ14623 411 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 CNGA3Q16281 694 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 PRRT3Q5FWE3 981 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 SLC9A4Q6AI14 798 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 DAAM2Q86T65 1068 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 TSPAN33Q86UF1 283 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 HID1Q8IV36 788 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 ACRBPQ8NEB7 543 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 OR4C6Q8NH72 309 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 GATA6Q92908 595 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 HDAC11Q96DB2 347 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 SLC13A1Q9BZW2 595 aa13.72□□□□□ -0.21
MRPL55-205ENST00000366731 APOBEC3BQ9UH17 382 aaKnown RBP13.72□□□□□ -0.21
MRPL55-205ENST00000366731 A0A1W2PQ67 120 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 CFAP69A5D8W1 941 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 NPIPB15A6NHN6 443 aaPredicted RBP13.71□□□□□ -0.22
MRPL55-205ENST00000366731 GCATO75600 419 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 RFPL3O75679 317 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 DKK1O94907 266 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.22
MRPL55-205ENST00000366731 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 ALPPL2P10696 532 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 CYP2A6P11509 494 aaPredicted RBP13.71□□□□□ -0.22
MRPL55-205ENST00000366731 ZFXP17010 805 aaPredicted RBP13.71□□□□□ -0.22
MRPL55-205ENST00000366731 GM2AP17900 193 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 HTR1BP28222 390 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 HNF1BP35680 557 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 ETV3P41162 512 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 MARCKSL1P49006 195 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 ZBTB17Q13105 803 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 ARHGEF7Q14155 803 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 PROX2Q3B8N5 592 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 CCNI2Q6ZMN8 369 aaPredicted RBP13.71□□□□□ -0.22
MRPL55-205ENST00000366731 SPOCD1Q6ZMY3 1216 aa13.71□□□□□ -0.22
MRPL55-205ENST00000366731 MACC1Q6ZN28 852 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms