RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 MATN2O00339 956 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 PIGNO95427 931 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 C2P06681 752 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 HALP42357 657 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 RXRGP48443 463 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 OGFOD2Q6N063 350 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 PRSS55Q6UWB4 352 aaPredicted RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 CHERPQ8IWX8 916 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 CCNYL1Q8N7R7 359 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 B3GALNT2Q8NCR0 500 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 ZNF669Q96BR6 464 aaPredicted RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 P2RY11Q96G91 374 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 SPATA13Q96N96 652 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 SERPINI1Q99574 410 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TOR3AQ9H497 397 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 COL11A1P12107 1806 aaPredicted RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 PHGDHO43175 533 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 TSC22D2O75157 780 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 CCDC166P0CW27 439 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 ZNF24P17028 368 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 GP5P40197 560 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 NAGLUP54802 743 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 RPL26P61254 145 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 DUSP4Q13115 394 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 RPS6KA2Q15349 733 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 KYAT1Q16773 422 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 GK5Q6ZS86 529 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 C7orf61Q8IZ16 206 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TMEM151AQ8N4L1 468 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TSPAN14Q8NG11 270 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 PABPC5Q96DU9 382 aaKnown RBP9.16□□□□□ -0.94
TOP1-201ENST00000361337 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TLK1Q9UKI8 766 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 STAP1Q9ULZ2 295 aa9.16□□□□□ -0.94
TOP1-201ENST00000361337 TCAF2A6NFQ2 919 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CSF2RAP15509 400 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 TPH1P17752 444 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 TFEBP19484 476 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 PRDX6P30041 224 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 OR1D2P34982 312 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 GRIA4P48058 902 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 GJA9P57773 515 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 SLC6A3Q01959 620 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 IKBKEQ14164 716 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 DPYSL2Q16555 572 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 RSBN1Q5VWQ0 802 aaPredicted RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 LCLAT1Q6UWP7 414 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 ADCY4Q8NFM4 1077 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 SCAMP5Q8TAC9 235 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 LZICQ8WZA0 190 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 KLHL8Q9P2G9 620 aaPredicted RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 SFMBT1Q9UHJ3 866 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 KCNU1A8MYU2 1149 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 FAM155AB1AL88 458 aaPredicted RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 TRIM13O60858 407 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 VAPBO95292 243 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 ITGB1P05556 798 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 SELPP16109 830 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CKMT2P17540 419 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 HOXD12P35452 270 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 NR1H2P55055 460 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 USP41Q3LFD5 358 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 MTX3Q5HYI7 312 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CERCAMQ5T4B2 595 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CYS1Q717R9 158 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CCDC117Q8IWD4 279 aaPredicted RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 ZNF567Q8N184 647 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 RBBP8Q99708 897 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 CIB1Q99828 191 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 OMDQ99983 421 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 GPATCH1Q9BRR8 931 aaKnown RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 EPS8L2Q9H6S3 715 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 NMRAL1Q9HBL8 299 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 TSR3Q9UJK0 312 aaKnown RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 SNX10Q9Y5X0 201 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 COPG1Q9Y678 874 aaKnown RBP9.15□□□□□ -0.94
TOP1-201ENST00000361337 USP3Q9Y6I4 520 aa9.15□□□□□ -0.94
TOP1-201ENST00000361337 MSI1O43347 362 aaKnown RBP9.15□□□□□ -0.95
TOP1-201ENST00000361337 GPR32O75388 356 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 BCAS2O75934 225 aaPredicted RBP9.15□□□□□ -0.95
TOP1-201ENST00000361337 GNAO1P09471 354 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 GSTT2P0CG29 244 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 GSTT2BP0CG30 244 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 ME2P23368 584 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 PNPLA4P41247 253 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 CAP1Q01518 475 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 NSUN2Q08J23 767 aaKnown RBP eCLIP9.15□□□□□ -0.95
TOP1-201ENST00000361337 PDAP1Q13442 181 aaKnown RBP9.15□□□□□ -0.95
TOP1-201ENST00000361337 PITRM1Q5JRX3 1037 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 C16orf89Q6UX73 402 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 SLC24A5Q71RS6 500 aa9.15□□□□□ -0.95
TOP1-201ENST00000361337 LSMEM2Q8N112 164 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms