RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SNX3O60493 162 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 MAGEC1O60732 1142 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 ITGB1P05556 798 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 ITGA2BP08514 1039 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 ANXA5P08758 320 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
RAB5B-201ENST00000360299 HALP42357 657 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 RAB10P61026 200 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 NTHL1P78549 312 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 OCA2Q04671 838 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 ADAMTSL2Q86TH1 951 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 TRABD2AQ86V40 505 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
RAB5B-201ENST00000360299 CMASQ8NFW8 434 aaPredicted RBP7.07□□□□□ -1.28
RAB5B-201ENST00000360299 CRYGNQ8WXF5 182 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 INPP5DQ92835 1189 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 CD101Q93033 1021 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 UBE2E3Q969T4 207 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 SIPA1Q96FS4 1042 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 LMAN1LQ9HAT1 526 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 PARVBQ9HBI1 364 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
RAB5B-201ENST00000360299 VPS51Q9UID3 782 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 SALL4Q9UJQ4 1053 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 FBXW11Q9UKB1 542 aa7.07□□□□□ -1.28
RAB5B-201ENST00000360299 CORO1CQ9ULV4 474 aaPredicted RBP7.07□□□□□ -1.28
RAB5B-201ENST00000360299 HEPACAM2A8MVW5 462 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TPP1O14773 563 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SERPINB5P36952 375 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 HCAR3P49019 387 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 PRIM2P49643 509 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CDH4P55283 916 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CHRNB3Q05901 458 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 NFYCQ13952 458 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 PON2Q15165 354 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 DPYSL2Q16555 572 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SOWAHAQ2M3V2 549 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CES3Q6UWW8 571 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CERS6Q6ZMG9 384 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CYP2U1Q7Z449 544 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 MILR1Q7Z6M3 343 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 IFNLR1Q8IU57 520 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 APLFQ8IW19 511 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 PHC3Q8NDX5 983 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 METTL6Q8TCB7 284 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 PHF21BQ96EK2 531 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 C1QTNF1Q9BXJ1 281 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 GPR62Q9BZJ7 368 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SSU72Q9NP77 194 aaKnown RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 LTBP1Q14766 1721 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TRAFD1O14545 582 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SLC31A1O15431 190 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 MSI1O43347 362 aaKnown RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TGM5O43548 720 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 ACSL4O60488 711 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 AP2A1O95782 977 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 MYBL2P10244 700 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 PRKCQQ04759 706 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 INCA1Q0VD86 236 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SIM2Q14190 667 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 AGKQ53H12 422 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 RNF43Q68DV7 783 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 VITQ6UXI7 678 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 ANKS1BQ7Z6G8 1248 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TDRPQ86YL5 185 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SLC44A1Q8WWI5 657 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CCDC3Q9BQI4 270 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SLC39A8Q9C0K1 460 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SDCBP2Q9H190 292 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 SLC25A51Q9H1U9 297 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 ASB8Q9H765 288 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 C10orf88Q9H8K7 445 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 COPS7BQ9H9Q2 264 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 NOD2Q9HC29 1040 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 ZNF446Q9NWS9 450 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 OPTCQ9UBM4 332 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 A0A1B0GVM2 712 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CPED1A4D0V7 1026 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TCAF2A6NFQ2 919 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 NCF1BA6NI72 391 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 NCF1CA8MVU1 366 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 BTN3A1O00481 513 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 RGS14O43566 566 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 KLF8O95600 359 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 NCF1P14598 390 aaPredicted RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 DDX6P26196 483 aaKnown RBP eCLIP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 GABRB2P47870 512 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CPA2P48052 419 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 MRPS35P82673 323 aaKnown RBP7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TFF2Q03403 129 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 TJAP1Q5JTD0 557 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 EXOC3L1Q86VI1 746 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 VPS33AQ96AX1 596 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 ZFYVE19Q96K21 471 aa7.06□□□□□ -1.28
RAB5B-201ENST00000360299 CNDP1Q96KN2 507 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms