RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 E2F7Q96AV8 911 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CFAP36Q96G28 342 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 APOPT1Q96IL0 206 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 MUC3BQ9H195 1237 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ADNPQ9H2P0 1102 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GPN2Q9H9Y4 310 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TCF7L2Q9NQB0 619 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 IL20Q9NYY1 176 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PCDHGA7Q9Y5G6 932 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SCN5AQ14524 2016 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 DLGAP1O14490 977 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 FAM189A1O60320 539 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SEMA3DO95025 777 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PAHP00439 452 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 FTLP02792 175 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ADRB2P07550 413 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SNRPAP09012 282 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 CKMT2P17540 419 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 GAP43P17677 238 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PSMC2P35998 433 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 YAP1P46937 504 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ARHGDIAP52565 204 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PKNOX1P55347 436 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 TARDBPQ13148 414 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 METTL7BQ6UX53 244 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZCCHC23Q6ZST2 131 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 MAVSQ7Z434 540 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PARP8Q8N3A8 854 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC20A1Q8WUM9 679 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 CDKL2Q92772 493 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 VWCEQ96DN2 955 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 GPR20Q99678 358 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PAQR5Q9NXK6 330 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 MAFFQ9ULX9 164 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 MAN2B2Q9Y2E5 1009 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 EVPLLA8MZ36 301 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PDXKO00764 312 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 AXIN1O15169 862 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 GFAPP14136 432 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ATF6P18850 670 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 RBL1P28749 1068 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 FMO4P31512 558 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 KRT20P35900 424 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 WNT7BP56706 349 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 GAD2Q05329 585 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC18A2Q05940 514 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 CEACAM7Q14002 265 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 DRAP1Q14919 205 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SHHQ15465 462 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 XKR3Q5GH77 459 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 MTX3Q5HYI7 312 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCNT1Q5JUK3 1230 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMEM240Q5SV17 173 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZC3H3Q8IXZ2 948 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 BADQ92934 168 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 HDAC11Q96DB2 347 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 DPEP3Q9H4B8 488 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 IFT22Q9H7X7 185 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 LIN7BQ9HAP6 207 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 SMOXQ9NWM0 555 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 FETUBQ9UGM5 382 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 CEP290O15078 2479 aa9.36□□□□□ -0.91
SMARCAL1-202ENST00000358207 PIK3R2O00459 728 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 B4GALT5O43286 388 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 NOL3O60936 208 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 SNNO75324 88 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 MT-ND3P03897 115 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 ETS1P14921 441 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GLRA2P23416 452 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GSTM2P28161 218 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GJC1P36383 396 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GPR85P60893 370 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 OCA2Q04671 838 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZNF33BQ06732 778 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 MTM1Q13496 603 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 TTLL4Q14679 1199 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCNA10Q16322 511 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 YIF1BQ5BJH7 314 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 CELF3Q5SZQ8 465 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GTF2IRD2BQ6EKJ0 949 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 GTF2IRD2Q86UP8 949 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 CRLF3Q8IUI8 442 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZCCHC7Q8N3Z6 543 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 FLCNQ8NFG4 579 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 CHAC2Q8WUX2 184 aa9.35□□□□□ -0.91
SMARCAL1-202ENST00000358207 CDRT15Q96T59 188 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms