RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 PSMG2Q969U7 264 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 LENG8Q96PV6 779 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 NAT9Q9BTE0 207 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 TTLL2Q9BWV7 592 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 SHCBP1LQ9BZQ2 653 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 SMOC2Q9H3U7 446 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 IGFLR1Q9H665 355 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 ZNF385DQ9H6B1 395 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 SUDS3Q9H7L9 328 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 CHCHD3Q9NX63 227 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 NUP205Q92621 2012 aa12.77□□□□□ -0.36
RTFDC1-202ENST00000357348 SLC12A8A0AV02 714 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 IMPDH2P12268 514 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 GABRR2P28476 465 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 ADRA1BP35368 520 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 CYP4F8P98187 520 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 GBE1Q04446 702 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 DLG3Q92796 817 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 SMPD4Q9NXE4 827 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 TRPM5Q9NZQ8 1165 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 SLC17A6Q9P2U8 582 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 BCAP29Q9UHQ4 241 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 PSAT1Q9Y617 370 aa12.77□□□□□ -0.37
RTFDC1-202ENST00000357348 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 HACD1B0YJ81 288 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 G3V2L1 256 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 H0YJX3 145 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 F9P00740 461 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 IGLV3-25P01717 112 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 IRF1P10914 325 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PIK3R1P27986 724 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 GP5P40197 560 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 NRIP1P48552 1158 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CXCR3P49682 368 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 HK2P52789 917 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 EMP3P54852 163 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SULT2A1Q06520 285 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 FRG1Q14331 258 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 HERC3Q15034 1050 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 RAB30Q15771 203 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CNGA3Q16281 694 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 GRTP1Q5TC63 336 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 TXNDC8Q6A555 127 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CCDC149Q6ZUS6 474 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CLEC14AQ86T13 490 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 GPR65Q8IYL9 337 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF781Q8N8C0 355 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 RP9Q8TA86 221 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 MAPK15Q8TD08 544 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PPP1R14BQ96C90 147 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CATSPER2Q96P56 530 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 TRIM62Q9BVG3 475 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PRDM16Q9HAZ2 1276 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 GKN1Q9NS71 199 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PCDHGB4Q9UN71 923 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 COCHO43405 550 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 H2AFYO75367 372 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CDK4P11802 303 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 KCNQ1P51787 676 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 NR1H2P55055 460 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 TBX4P57082 545 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 C12orf76Q8N812 135 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 KYQ8NBH2 561 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 LRGUKQ96M69 825 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 CPNE1Q99829 537 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 APOL5Q9BWW9 433 aa12.76□□□□□ -0.37
RTFDC1-202ENST00000357348 HNRNPRO43390 633 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 PAGE1O75459 146 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 FAM58BPP0C7Q3 252 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 TYK2P29597 1187 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 CCR1P32246 355 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms