RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 DGKGP49619 791 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SEC13P55735 322 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RASA2Q15283 850 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ZFP1Q6P2D0 407 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 FAM151BQ6UXP7 276 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 PRDM8Q9NQV8 689 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 E9PAM4 449 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 H0Y858 1186 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 GOT1P17174 413 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 BMP7P18075 431 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 AP1ARQ63HQ0 302 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CORO1CQ9ULV4 474 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 MC4RP32245 332 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 LILRA4P59901 499 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 MTAPQ13126 283 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SETD9Q8NE22 299 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 NELL1Q92832 810 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 PDZD7Q9H5P4 517 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 STMN3Q9NZ72 180 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 KDM3BQ7LBC6 1761 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 PLIN4Q96Q06 1357 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 ATP9AO75110 1047 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 HSD17B2P37059 387 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 KLC1Q07866 573 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 PTPRNQ16849 979 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CCDC81Q6ZN84 652 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RDH11Q8TC12 318 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SNX27Q96L92 541 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SLC38A2Q96QD8 506 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 NDUFS1P28331 727 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ARL2P36404 184 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 PRKCIP41743 596 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 AQP5P55064 265 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RAB10P61026 200 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 E2F4Q16254 413 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 TAPT1Q6NXT6 567 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 IL31RAQ8NI17 732 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 HEPHQ9BQS7 1158 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 STRADBQ9C0K7 418 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
FN1-204ENST00000356005 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ERCC2P18074 760 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 WARSP23381 471 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 ADRM1Q16186 407 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ZC3H14Q6PJT7 736 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 FAM180AQ6UWF9 173 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 BTBD9Q96Q07 612 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CDC14AQ9UNH5 594 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 NAALADL1Q9UQQ1 740 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 GLYATL1P3A0A0U1RQE8 302 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 MGRN1O60291 552 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RARAP10276 462 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CTPS1P17812 591 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CDH3P22223 829 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 CCND1P24385 295 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 TPP2P29144 1249 aaPredicted RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 GDI1P31150 447 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 PRKAG1P54619 331 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
FN1-204ENST00000356005 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 SLC12A4Q9UP95 1085 aa11.3□□□□□ -0.6
FN1-204ENST00000356005 RGS5O15539 181 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 ACRP10323 421 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 ASMTP46597 345 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 STXBP1P61764 594 aaKnown RBP11.29□□□□□ -0.6
FN1-204ENST00000356005 NR1D2Q14995 579 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 WDR93Q6P2C0 686 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 PEG10Q86TG7 708 aaKnown RBP11.29□□□□□ -0.6
FN1-204ENST00000356005 GJD3Q8N144 294 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 OR52K1Q8NGK4 314 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 AP2M1Q96CW1 435 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 REEP1Q9H902 201 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 GEMIN8Q9NWZ8 242 aaKnown RBP11.29□□□□□ -0.6
FN1-204ENST00000356005 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 SLC35G6P0C7Q6 338 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 ADH5P11766 374 aa11.29□□□□□ -0.6
FN1-204ENST00000356005 PSMD4P55036 377 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms