RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 SLC25A23Q9BV35 468 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ISM1B1AKI9 464 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 HOXD13P35453 343 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 DGKGP49619 791 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 DSG1Q02413 1049 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ANKRD22Q5VYY1 191 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 TTC33Q6PID6 262 aaPredicted RBP14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ZNF655Q8N720 491 aaPredicted RBP14.95□□□□□ -0.02
COL17A1-201ENST00000353479 SLC39A8Q9C0K1 460 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ZFP14Q9HCL3 533 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 CD84Q9UIB8 345 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 NDRG2Q9UN36 371 aaKnown RBP14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ENTPD4Q9Y227 616 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 TULP2O00295 520 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 CCL22O00626 93 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 INSIG1O15503 277 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 ULK1O75385 1050 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 FAM155BO75949 473 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 RGS20O76081 388 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 PRNPP04156 253 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 HNRNPLP14866 589 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL17A1-201ENST00000353479 GATMP50440 423 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 HLA-DQA1Q5Y7H0 255 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 RPAINQ86UA6 219 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 QRFPRQ96P65 431 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 GKN1Q9NS71 199 aa14.95□□□□□ -0.02
COL17A1-201ENST00000353479 SKP1P63208 163 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 TJAP1Q5JTD0 557 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 LDB1Q86U70 411 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 CPNE8Q86YQ8 564 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 WRAP53Q9BUR4 548 aaKnown RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 EXOSC4Q9NPD3 245 aaKnown RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 KLHL28Q9NXS3 571 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 PER2O15055 1255 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 IRAK2O43187 625 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 WDR47O94967 919 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 NEK3P51956 506 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GAD2Q05329 585 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 CCDC81Q6ZN84 652 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GPRIN3Q6ZVF9 776 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 C10orf107Q8IVU9 208 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 OR14C36Q8NHC7 312 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 SH3RF2Q8TEC5 729 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 LRRC15Q8TF66 581 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 TPD52L3Q96J77 140 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 NDEL1Q9GZM8 345 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 TLR6Q9Y2C9 796 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GSAPA4D1B5 854 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 DNM1LO00429 736 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GCATO75600 419 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 ERVK-21P61565 698 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 ELP6Q0PNE2 266 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 CSTF3Q12996 717 aaKnown RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 OSTM1Q86WC4 334 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 OR10G6Q8NH81 332 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 CCT7Q99832 543 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 ABCB8Q9NUT2 735 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GJA1P17302 382 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 SPAM1P38567 509 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 HSPA13P48723 471 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 SPIDRQ14159 915 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 CCDC85BQ15834 202 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 LIPMQ5VYY2 423 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 DHFR2Q86XF0 187 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 STARD8Q92502 1023 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 GFM2Q969S9 779 aaKnown RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 TBATAQ96M53 351 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 MECRQ9BV79 373 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 BCO2Q9BYV7 579 aa14.94□□□□□ -0.02
COL17A1-201ENST00000353479 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
COL17A1-201ENST00000353479 PRMT5O14744 637 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 PDE5AO76074 875 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 IL10RBQ08334 325 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ZDHHC20Q5W0Z9 365 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 PIWIL4Q7Z3Z4 852 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TIFAQ96CG3 184 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 CDRT15Q96T59 188 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 CCSER2Q9H7U1 834 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 AKAP7Q9P0M2 348 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ASB3Q9Y575 518 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 MYH13Q9UKX3 1938 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 GUCY1B2O75343 617 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 GABRB2P47870 512 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 HADHBP55084 474 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 HECTD2Q5U5R9 776 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 APTXQ7Z2E3 356 aaKnown RBP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 ZNF786Q8N393 782 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 GPR156Q8NFN8 814 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 COL26A1Q96A83 441 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TBCDQ9BTW9 1192 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 SLC4A5Q9BY07 1137 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 NPEPPSL1A6NEC2 478 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 SGTAO43765 313 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 COL6A1P12109 1028 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TRIM32Q13049 653 aa14.93□□□□□ -0.02
COL17A1-201ENST00000353479 CPSF6Q16630 551 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL17A1-201ENST00000353479 TMEM154Q6P9G4 183 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms