RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMCO1Q9UM00 188 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 VAPBO95292 243 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SYPP08247 313 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 F7P08709 466 aaPredicted RBP10.94□□□□□ -0.66
CLCN6-202ENST00000346436 FGFR3P22607 806 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 SLC39A4Q6P5W5 647 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 XYLT1Q86Y38 959 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 BORCS6Q96GS4 357 aa10.94□□□□□ -0.66
CLCN6-202ENST00000346436 DHX15O43143 795 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PEX1O43933 1283 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 KRT8P05787 483 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 BRCC3P46736 316 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 SLC16A1P53985 500 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 RALGDSQ12967 914 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 C6orf89Q6UWU4 347 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 DENND1AQ8TEH3 1009 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HMGB4Q8WW32 186 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CNDP1Q96KN2 507 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 DDX18Q9NVP1 670 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 RABGEF1Q9UJ41 708 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 GSC2O15499 205 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CNTFP26441 200 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 MASP1P48740 699 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 NUP107P57740 925 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 DDR2Q16832 855 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 KHDC1Q4VXA5 237 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 BHLHB9Q6PI77 547 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 VITQ6UXI7 678 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ANKRD52Q8NB46 1076 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PIWIL2Q8TC59 973 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CCDC134Q9H6E4 229 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 EFCAB1Q9HAE3 211 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 NEUROD4Q9HD90 331 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PAPSS1O43252 624 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HNRNPCP07910 306 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■□□□□ 9.4
CLCN6-202ENST00000346436 ETS2P15036 469 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 GPR15P49685 360 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PUS10Q3MIT2 529 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 AGKQ53H12 422 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 UNC5AQ6ZN44 842 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 C10orf107Q8IVU9 208 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 FAM126AQ9BYI3 521 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ASB8Q9H765 288 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 MYO1GB0I1T2 1018 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CLDN5O00501 218 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 UGT1A9O60656 530 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 FKBP6O75344 327 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 KCNA5P22460 613 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CD151P48509 253 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CBX2Q14781 532 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 OASLQ15646 514 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 TRIP4Q15650 581 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PACS1Q6VY07 963 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 SLC44A2Q8IWA5 706 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF786Q8N393 782 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF555Q8NEP9 628 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HIC2Q96JB3 615 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 UGT1A7Q9HAW7 530 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 UGT1A10Q9HAW8 530 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 UGT1A8Q9HAW9 530 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 CCNT2O60583 730 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HIST1H2ABP04908 130 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ANPEPP15144 967 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 GBE1Q04446 702 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HIST3H2AQ7L7L0 130 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 PCDH20Q8N6Y1 951 aaKnown RBP10.93□□□□□ -0.66
CLCN6-202ENST00000346436 LMO3Q8TAP4 145 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 HIST1H2ACQ93077 130 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 TBL1YQ9BQ87 522 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 DPEP2Q9H4A9 486 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 POLG2Q9UHN1 485 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 ANAPC2Q9UJX6 822 aa10.93□□□□□ -0.66
CLCN6-202ENST00000346436 TRIM13O60858 407 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 RB1P06400 928 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 CDH3P22223 829 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 HPCAL1P37235 193 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 LRRC8BQ6P9F7 803 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 DLK2Q6UY11 383 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 LPCAT2Q7L5N7 544 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ZC3H3Q8IXZ2 948 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ULK2Q8IYT8 1036 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 KYQ8NBH2 561 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 NELL2Q99435 816 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ECSITQ9BQ95 431 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 CRTAC1Q9NQ79 661 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 LGALS13Q9UHV8 139 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 PCDHGB3Q9Y5G1 929 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
CLCN6-202ENST00000346436 ERI2A8K979 691 aaKnown RBP10.92□□□□□ -0.66
CLCN6-202ENST00000346436 TRDMT1O14717 391 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms