RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 COG5Q9UP83 839 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TET2Q6N021 2002 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 DENND3A2RUS2 1198 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 FAM149AA5PLN7 773 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 C2CD2LO14523 706 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MAP2K7O14733 419 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 IFNA2P01563 188 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 NOMO3P69849 1222 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 NOMO1Q15155 1222 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SV2CQ496J9 727 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ABCA11PQ4W5N1 156 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 OVOS1Q6IE37 1185 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DGLUCYQ7Z3D6 616 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ERGIC2Q96RQ1 377 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 NLNQ9BYT8 704 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SLA2Q9H6Q3 261 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ELL3Q9HB65 397 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 TRIM36Q9NQ86 728 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF219Q9P2Y4 722 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 PLA2R1Q13018 1463 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 PRG4Q92954 1404 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 BBIP1A8MTZ0 92 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SGTAO43765 313 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 TULP3O75386 442 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 VNN2O95498 520 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 IFNGP01579 166 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ALAS1P13196 640 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DLSTP36957 453 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 NAGLUP54802 743 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DYNLL1P63167 89 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 DPYDQ12882 1025 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ASTE1Q2TB18 679 aaPredicted RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 CXorf57Q6NSI4 855 aaKnown RBP6.19□□□□□ -1.42
VCAN-203ENST00000343200 KATNAL2Q8IYT4 538 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SVOPLQ8N434 492 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 DPF1Q92782 380 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 MUC3BQ9H195 1237 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 ZNF232Q9UNY5 417 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 HIF3AQ9Y2N7 669 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 SHPRHQ149N8 1683 aa6.19□□□□□ -1.42
VCAN-203ENST00000343200 FABP12A6NFH5 140 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TRDMT1O14717 391 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 NPPAP01160 153 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ANXA3P12429 323 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ETV5P41161 510 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MECP2P51608 486 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 PPP5CP53041 499 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ALG11Q2TAA5 492 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 OGFOD2Q6N063 350 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PDXDC2PQ6P474 469 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 KCTD8Q6ZWB6 473 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MYO1HQ8N1T3 1032 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 METTL25Q8N6Q8 603 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ELMO1Q92556 727 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MTRRQ9UBK8 725 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ANGPT4Q9Y264 503 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PCDHB2Q9Y5E7 798 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZC3H4Q9UPT8 1303 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 CREBBPQ92793 2442 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PER2O15055 1255 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TPPPO94811 219 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TUBG1P23258 451 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 AQP4P55087 323 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PEX3P56589 373 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 BTBD16Q32M84 506 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MTX3Q5HYI7 312 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 FAM91A1Q658Y4 838 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 LRRN1Q6UXK5 716 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 DPY19L3Q6ZPD9 716 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 AHSA2Q719I0 299 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PGAP1Q75T13 922 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 DSG4Q86SJ6 1040 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PARP8Q8N3A8 854 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PLEKHO2Q8TD55 490 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 ZNF607Q96SK3 696 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CDH22Q9UJ99 828 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 DGAT1O75907 488 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC2A3P11169 496 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 HK1P19367 917 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC6A2P23975 617 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 HOXD12P35452 270 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PRELPP51888 382 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 HUNKP57058 714 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CYP4F8P98187 520 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 C1QBPQ07021 282 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 HES5Q5TA89 166 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MAB21L3Q8N8X9 362 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MARCH10Q8NA82 808 aaPredicted RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 OR2L3Q8NG85 312 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 SLC7A14Q8TBB6 771 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PABPC5Q96DU9 382 aaKnown RBP6.18□□□□□ -1.42
VCAN-203ENST00000343200 MID1IP1Q9NPA3 183 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 TMEM45AQ9NWC5 275 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 MAGEL2Q9UJ55 1249 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CLTCL1P53675 1640 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 GLI2P10070 1586 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CYP3A4P08684 503 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 PRKCAP17252 672 aa6.18□□□□□ -1.42
VCAN-203ENST00000343200 CDC25AP30304 524 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms