RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 ZNF385DQ9H6B1 395 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 GMPR2Q9P2T1 348 aaKnown RBP13.78□□□□□ -0.2
SYDE1-201ENST00000342784 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 LRRIQ4A6NIV6 560 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 SNAP29O95721 258 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 CST3P01034 146 aaPredicted RBP13.78□□□□□ -0.2
SYDE1-201ENST00000342784 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
SYDE1-201ENST00000342784 CTRB1P17538 263 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 STX1BP61266 288 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 ATP6V0D1P61421 351 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 ORC1Q13415 861 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 ANO4Q32M45 955 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 CTRB2Q6GPI1 263 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 IFNEQ86WN2 208 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 XYLT1Q86Y38 959 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 RXFP2Q8WXD0 754 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 PPP1R16BQ96T49 567 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 FUNDC2Q9BWH2 189 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
SYDE1-201ENST00000342784 AGO4Q9HCK5 861 aaKnown RBP13.78□□□□□ -0.2
SYDE1-201ENST00000342784 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
SYDE1-201ENST00000342784 SNTNA6NMZ2 147 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 CENPBD1B2RD01 187 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 INPP4BO15327 924 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 NRP2O60462 931 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 RASAL1O95294 804 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 NAGAP17050 411 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 LEPRP48357 1165 aaKnown RBP13.77□□□□□ -0.2
SYDE1-201ENST00000342784 KRT6CP48668 564 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 LSM3P62310 102 aaKnown RBP13.77□□□□□ -0.2
SYDE1-201ENST00000342784 CLDN10P78369 228 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 ECT2LQ008S8 904 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 SLC13A2Q13183 592 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 LAMC2Q13753 1193 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 CYP51A1Q16850 503 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 TKFCQ3LXA3 575 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 C6orf10Q5SRN2 563 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 ZNF598Q86UK7 904 aaKnown RBP13.77□□□□□ -0.2
SYDE1-201ENST00000342784 SLC51BQ86UW2 128 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 CCDC103Q8IW40 242 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 TMEM130Q8N3G9 435 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 ANKRD52Q8NB46 1076 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.2
SYDE1-201ENST00000342784 FEM1CQ96JP0 617 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 CSF3RQ99062 836 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 RBBP8Q99708 897 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 SYBUQ9NX95 663 aa13.77□□□□□ -0.2
SYDE1-201ENST00000342784 ABCB7O75027 752 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 IL18RAPO95256 599 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 FCGR1AP12314 374 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 LIMK2P53671 638 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 IFITM3Q01628 133 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 PRKCEQ02156 737 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 SQLEQ14534 574 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 DGUOKQ16854 277 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 ZNF699Q32M78 642 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 SLFN12LQ6IEE8 588 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 POC5Q8NA72 575 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 PCDH19Q8TAB3 1148 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 TRIT1Q9H3H1 467 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 ANGPTL3Q9Y5C1 460 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 RAD54BQ9Y620 910 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 V9GYQ6 96 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 CABYRO75952 493 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 UGT2B4P06133 528 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 CDH1P12830 882 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 CCNCP24863 283 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 NAMPTP43490 491 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 JAK3P52333 1124 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 SNX17Q15036 470 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 AASDHQ4L235 1098 aaPredicted RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 RAB6CQ53S08 254 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 UBE2UQ5VVX9 321 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 PAF1Q8N7H5 531 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 IL31RAQ8NI17 732 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 VPS33AQ96AX1 596 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 IL12RB2Q99665 862 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 RAB6CQ9H0N0 254 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 GMIPQ9P107 970 aa13.77□□□□□ -0.21
SYDE1-201ENST00000342784 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
SYDE1-201ENST00000342784 K7ERI5 159 aa13.76□□□□□ -0.21
SYDE1-201ENST00000342784 XYLBO75191 536 aa13.76□□□□□ -0.21
SYDE1-201ENST00000342784 MT-CO1P00395 513 aa13.76□□□□□ -0.21
SYDE1-201ENST00000342784 CDH5P33151 784 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms