RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TOR1BO14657 336 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 MFN2O95140 757 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 BMP4P12644 408 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 CYP2B6P20813 491 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 ASPAP45381 313 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 SLC10A2Q12908 348 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 SNTA1Q13424 505 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 TEDDM1Q5T9Z0 273 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 KIAA1841Q6NSI8 718 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 ZNF677Q86XU0 584 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 KIAA0319LQ8IZA0 1049 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 BPIFB6Q8NFQ5 453 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 OR5H6Q8NGV6 325 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 OR2T3Q8NH03 318 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 JPH3Q8WXH2 748 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 LENG8Q96PV6 779 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 NIF3L1Q9GZT8 377 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 TRPV6Q9H1D0 765 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 MTRRQ9UBK8 725 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 SIX4Q9UIU6 781 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 LAMA2P24043 3122 aaKnown RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 ANK1P16157 1881 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 STX16-NPEPL1H3BU86 382 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 TNNC2P02585 160 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 ITGB3P05106 788 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 MYL4P12829 197 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 FLT3LGP49771 235 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 VAC14Q08AM6 782 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 SNX17Q15036 470 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 GTF2IRD2BQ6EKJ0 949 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 GTF2IRD2Q86UP8 949 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 C1orf127Q8N9H9 656 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 TP53I13Q8NBR0 393 aaPredicted RBP11.92□□□□□ -0.5
RTN3-203ENST00000341307 SLCO4A1Q96BD0 722 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 OMA1Q96E52 524 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 PLSCR3Q9NRY6 295 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 PNPOQ9NVS9 261 aa11.92□□□□□ -0.5
RTN3-203ENST00000341307 EVPLLA8MZ36 301 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
RTN3-203ENST00000341307 CCNKO75909 580 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 CLIC3O95833 236 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ELNP15502 786 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SPNP16150 400 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ME2P23368 584 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 GJC1P36383 396 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 HK2P52789 917 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 DSC3Q14574 896 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 TAF5Q15542 800 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ANO4Q32M45 955 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 CHSY3Q70JA7 882 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 PALM2Q8IXS6 379 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 FAM156AQ8NDB6 213 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 S100ZQ8WXG8 99 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SGCDQ92629 289 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 HDAC11Q96DB2 347 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 VMP1Q96GC9 406 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 OR5K3A6NET4 321 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 E7ESA3 106 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 GSRP00390 522 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 KRT8P05787 483 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 INHBAP08476 426 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 MX2P20592 715 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 YAP1P46937 504 aaKnown RBP11.91□□□□□ -0.5
RTN3-203ENST00000341307 HCAR3P49019 387 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
RTN3-203ENST00000341307 PTP4A2Q12974 167 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 TRIM32Q13049 653 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 MAMLD1Q13495 774 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ZBTB49Q6ZSB9 765 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 IGDCC3Q8IVU1 814 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ADGRG5Q8IZF4 528 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 ZCCHC7Q8N3Z6 543 aaKnown RBP11.91□□□□□ -0.5
RTN3-203ENST00000341307 NFKBIZQ9BYH8 718 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SDCBP2Q9H190 292 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 NOL11Q9H8H0 719 aaKnown RBP11.91□□□□□ -0.5
RTN3-203ENST00000341307 PKD2L2Q9NZM6 624 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SLCO3A1Q9UIG8 710 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 SNX13Q9Y5W8 968 aa11.91□□□□□ -0.5
RTN3-203ENST00000341307 TCRBV9S1A1TA0A576 114 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 CFLARO15519 480 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SGTAO43765 313 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 USP12O75317 370 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 RFPL1O75677 317 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 TOP3BO95985 862 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms