RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MYEOVQ96EZ4 313 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CDK5RAP1Q96SZ6 601 aaKnown RBP11.28□□□□□ -0.6
ATXN3-201ENST00000340660 TREX2Q9BQ50 279 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-201ENST00000340660 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 FBXO8Q9NRD0 319 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
ATXN3-201ENST00000340660 SOX13Q9UN79 622 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
ATXN3-201ENST00000340660 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 A6NL46 340 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 MCF2LO15068 1137 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 PHACTR2O75167 634 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 TMEM191BP0C7N4 346 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 MAN1A1P33908 653 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 MCM7P33993 719 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 RPS21P63220 83 aaKnown RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 NUCB1Q02818 461 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 FOLH1Q04609 750 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 DNASE1L3Q13609 305 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 ALG11Q2TAA5 492 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 C6orf15Q6UXA7 325 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 MEX3BQ6ZN04 569 aaKnown RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 TMEM102Q8N9M5 508 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 OR5B17Q8NGF7 314 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 PRICKLE1Q96MT3 831 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 RUFY1Q96T51 708 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 ACTL8Q9H568 366 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
ATXN3-201ENST00000340660 STOML1Q9UBI4 398 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
ATXN3-201ENST00000340660 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
ATXN3-201ENST00000340660 B4DGG1 531 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 EREGO14944 169 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 ZNF185O15231 689 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 ALOX15BO15296 676 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 TNFRSF21O75509 655 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 IGFALSP35858 605 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 NDST1P52848 882 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 IL10RAQ13651 578 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 RAPSNQ13702 412 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 NR1D2Q14995 579 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 SLFN12LQ6IEE8 588 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 PLEKHA7Q6IQ23 1121 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 KIAA1161Q6NSJ0 714 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 XKRXQ6PP77 449 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 CCDC186Q7Z3E2 898 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 CARNMT1Q8N4J0 409 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 SLC2A14Q8TDB8 520 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 GRHL3Q8TE85 626 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 KRTAP17-1Q9BYP8 105 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 ULBP3Q9BZM4 244 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
ATXN3-201ENST00000340660 RBAKQ9NYW8 714 aaPredicted RBP11.26□□□□□ -0.61
ATXN3-201ENST00000340660 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
ATXN3-201ENST00000340660 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 KPNA3O00505 521 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 KIF20AO95235 890 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 FAM163BP0C2L3 166 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 ZNF18P17022 549 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 EIF4A3P38919 411 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 PBX1P40424 430 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 BLKP51451 505 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 VAMP7P51809 220 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 KIF11P52732 1056 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 MAZP56270 477 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 RPS18P62269 152 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 KRT83P78385 493 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 ADORA2A-AS1P86434 159 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 FAM133BQ5BKY9 247 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 CLEC20AQ6ZU45 233 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 ERN2Q76MJ5 926 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 TMEM200AQ86VY9 491 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 ZNF557Q8N988 423 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 FAM46DQ8NEK8 389 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 CT55Q8WUE5 264 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 POMGNT1Q8WZA1 660 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
ATXN3-201ENST00000340660 SAAL1Q96ER3 474 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 FIZ1Q96SL8 496 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 KRTAP9-2Q9BYQ4 174 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 LIME1Q9H400 295 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
ATXN3-201ENST00000340660 SSU72P8A0A1W2PR75 194 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 IGLON5A6NGN9 336 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 FAM171A2A8MVW0 826 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 GSC2O15499 205 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 FZD6O60353 706 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 DTNBO60941 627 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 LATS1O95835 1130 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms