RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 C19orf48Q6RUI8 117 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 SLCO6A1Q86UG4 719 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 BBS5Q8N3I7 341 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 ARRDC2Q8TBH0 407 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 NSMCE1Q8WV22 266 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 KRT35Q92764 455 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 OLFM3Q96PB7 478 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 SEMA3CQ99985 751 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 RBM22Q9NW64 420 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRKN-201ENST00000338468 IMPACTQ9P2X3 320 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 PCDHB9Q9Y5E1 797 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 COL5A1P20908 1838 aaPredicted RBP15.35■□□□□ 0.05
PRKN-201ENST00000338468 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
PRKN-201ENST00000338468 ARID1BQ8NFD5 2236 aaPredicted RBP15.35■□□□□ 0.05
PRKN-201ENST00000338468 IGSF10Q6WRI0 2623 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 A0A0U1RQJ8 604 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 SPTY2D1-AS1A0A0U1RR47 76 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 CFAP69A5D8W1 941 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 BTNL10A8MVZ5 291 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 APOL1O14791 398 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PJA2O43164 708 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 FZD6O60353 706 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 SDC3O75056 442 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 DKK1O94907 266 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 CAPNS1P04632 268 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 HLA-DQB2P05538 268 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 ITGAVP06756 1048 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 ATXN1LP0C7T5 689 aaKnown RBP15.34■□□□□ 0.05
PRKN-201ENST00000338468 CCNB1P14635 433 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 RABIFP47224 123 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 DSC2Q02487 901 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PPIDQ08752 370 aaKnown RBP15.34■□□□□ 0.05
PRKN-201ENST00000338468 NIPAL4Q0D2K0 466 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PTPRRQ15256 657 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 IRF4Q15306 451 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 ZNF542PQ5EBM4 170 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 LIPIQ6XZB0 460 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 SPOCD1Q6ZMY3 1216 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 DPPA4Q7L190 304 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PDZD3Q86UT5 571 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 DCP2Q8IU60 420 aaKnown RBP15.34■□□□□ 0.05
PRKN-201ENST00000338468 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 KATNAL2Q8IYT4 538 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 SLC25A45Q8N413 288 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 CNTD1Q8N815 330 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PNPLA1Q8N8W4 532 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 CDC6Q99741 560 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
PRKN-201ENST00000338468 UCKL1Q9NWZ5 548 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 B4GALT6Q9UBX8 382 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 KLF15Q9UIH9 416 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
PRKN-201ENST00000338468 HEY1Q9Y5J3 304 aa15.34■□□□□ 0.05
PRKN-201ENST00000338468 A8MX80 341 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 KCNK1O00180 336 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 PGLSO95336 258 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 PDHA1P08559 390 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 GIMD1P0DJR0 217 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 KRT10P13645 584 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 VAV2P52735 878 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 POLR2LP62875 67 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 DYNLT1P63172 113 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 ZBTB17Q13105 803 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 PDE1CQ14123 709 aaPredicted RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 LLGL1Q15334 1064 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 B4GALNT4Q76KP1 1039 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 RFX6Q8HWS3 928 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 CBARPQ8N350 705 aaPredicted RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 EID2Q8N6I1 236 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 PDCD6IPQ8WUM4 868 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 PIH1D2Q8WWB5 315 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 ADAMTS14Q8WXS8 1223 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 IFT43Q96FT9 208 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 SMIM14Q96QK8 99 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 IL12RB2Q99665 862 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 MAK16Q9BXY0 300 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 POLR1EQ9GZS1 481 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 CCDC86Q9H6F5 360 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 AMACRQ9UHK6 382 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 RAI2Q9Y5P3 530 aa15.33■□□□□ 0.04
PRKN-201ENST00000338468 SMG1Q96Q15 3661 aaKnown RBP15.33■□□□□ 0.04
PRKN-201ENST00000338468 TNFSF14O43557 240 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 PIAS2O75928 621 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 CPP00450 1065 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 JCHAINP01591 159 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 MMP2P08253 660 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
PRKN-201ENST00000338468 LHCGRP22888 699 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 DGKAP23743 735 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 ITKQ08881 620 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
PRKN-201ENST00000338468 LRRC14Q15048 493 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 CNGA3Q16281 694 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 COL28A1Q2UY09 1125 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 SOWAHCQ53LP3 525 aaPredicted RBP15.32■□□□□ 0.04
PRKN-201ENST00000338468 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
PRKN-201ENST00000338468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms